RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 TRIM45Q9H8W5 580 aaPredicted RBP11.53□□□□□ -0.56
VAPB-204ENST00000475243 CROCC2H7BZ55 1655 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 ANO9A1A5B4 782 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 TRAPPC3O43617 180 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 ARIH2O95376 493 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 LRRC23Q53EV4 343 aaPredicted RBP11.53□□□□□ -0.56
VAPB-204ENST00000475243 SGO1Q5FBB7 561 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 TJAP1Q5JTD0 557 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 ATPAF2Q8N5M1 289 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 ATL2Q8NHH9 583 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 ZC3H15Q8WU90 426 aaKnown RBP11.53□□□□□ -0.56
VAPB-204ENST00000475243 DDX50Q9BQ39 737 aaKnown RBP11.53□□□□□ -0.56
VAPB-204ENST00000475243 TRIM51Q9BSJ1 452 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 TMEM161AQ9NX61 479 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 PRDM15P57071 1507 aaPredicted RBP11.53□□□□□ -0.56
VAPB-204ENST00000475243 CPSF1Q10570 1443 aaKnown RBP11.53□□□□□ -0.56
VAPB-204ENST00000475243 C3orf70A6NLC5 250 aaPredicted RBP11.53□□□□□ -0.56
VAPB-204ENST00000475243 ZNF197O14709 1029 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 NDUFS3O75489 264 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 NT5C2P49902 561 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 RAD23BP54727 409 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 DMC1Q14565 340 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 EFCAB12Q6NXP0 572 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 TADA2BQ86TJ2 420 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 DTX3LQ8TDB6 740 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 ATP6V1G3Q96LB4 118 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 TRIM9Q9C026 710 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 YIPF3Q9GZM5 350 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 SMARCAL1Q9NZC9 954 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 DOLKQ9UPQ8 538 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 CSE1LP55060 971 aaKnown RBP11.53□□□□□ -0.56
VAPB-204ENST00000475243 RBP5P82980 135 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 ZNF543Q08ER8 600 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 ORC2Q13416 577 aaPredicted RBP11.53□□□□□ -0.56
VAPB-204ENST00000475243 PKN3Q6P5Z2 889 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 C11orf96Q7Z7L8 435 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 SLC7A14Q8TBB6 771 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 SENP7Q9BQF6 1050 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 ARHGAP26Q9UNA1 814 aa11.53□□□□□ -0.56
VAPB-204ENST00000475243 FMR1Q06787 632 aaKnown RBP eCLIP11.52□□□□□ -0.56
VAPB-204ENST00000475243 KCNV1Q6PIU1 500 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 BTN2A2Q8WVV5 523 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 PTPRN2Q92932 1015 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 SMARCAD1Q9H4L7 1026 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 KBTBD13C9JR72 458 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 FMO5P49326 533 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 ST8SIA6P61647 398 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 CYTH1Q15438 398 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 TERF2Q15554 542 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 PATL1Q86TB9 770 aaKnown RBP11.52□□□□□ -0.56
VAPB-204ENST00000475243 RCOR2Q8IZ40 523 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 ADNPQ9H2P0 1102 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 LATS2Q9NRM7 1088 aa11.52□□□□□ -0.56
VAPB-204ENST00000475243 PLEKHG2Q9H7P9 1386 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 TET3O43151 1660 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 ENO3P13929 434 aaPredicted RBP11.52□□□□□ -0.57
VAPB-204ENST00000475243 HSPA9P38646 679 aaKnown RBP11.52□□□□□ -0.57
VAPB-204ENST00000475243 UBE3AQ05086 875 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 DHX34Q14147 1143 aaKnown RBP11.52□□□□□ -0.57
VAPB-204ENST00000475243 KRT72Q14CN4 511 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 C6orf10Q5SRN2 563 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 NUDT18Q6ZVK8 323 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 RAB42Q8N4Z0 105 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 TRIM62Q9BVG3 475 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 STK33Q9BYT3 514 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 TRABDQ9H4I3 376 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 ZNRF3Q9ULT6 936 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 PKP3Q9Y446 797 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 MRFAP1Q9Y605 127 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 ABCA8O94911 1581 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 PFASO15067 1338 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 hCG_2014768A0A024R1R8 64 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 GALCP54803 685 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 R3HDM1Q15032 1099 aaKnown RBP11.52□□□□□ -0.57
VAPB-204ENST00000475243 EPC2Q52LR7 807 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 ATG9AQ7Z3C6 839 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 TTC39CQ8N584 583 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 FAM96AQ9H5X1 160 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 PRR12Q9ULL5 1215 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 PRR23AA6NEV1 266 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 ANO5Q75V66 913 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 TEX13BQ9BXU2 312 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 TMEM39BQ9GZU3 492 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 NDE1Q9NXR1 346 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 DAGLAQ9Y4D2 1042 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 CEP152O94986 1710 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 MYMKA6NI61 221 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 RPS6KA5O75582 802 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 MAGEA9P43362 315 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 GTF2H3Q13889 308 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 KYAT1Q16773 422 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 CYP4A22Q5TCH4 519 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 CDC42EP5Q6NZY7 148 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 SH2D3CQ8N5H7 860 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 STOML1Q9UBI4 398 aa11.52□□□□□ -0.57
VAPB-204ENST00000475243 OVOS2A0A0G2JMS6 1433 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 OVOS2A0A0J9YW53 1432 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 IL10P22301 178 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 AP3M2P53677 418 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 OVOS2Q6IE36 1432 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms