RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 PROZP22891 400 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 ZXDAP98168 799 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 PSMD5Q16401 504 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 UPP1Q16831 310 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 RRAGBQ5VZM2 374 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 DCLRE1AQ6PJP8 1040 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 ZPBP2Q6X784 338 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 CCDC149Q6ZUS6 474 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 DYMQ7RTS9 669 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 KRI1Q8N9T8 703 aaKnown RBP10.3□□□□□ -0.76
PDPN-204ENST00000475043 TDRD5Q8NAT2 981 aaKnown RBP10.3□□□□□ -0.76
PDPN-204ENST00000475043 DDX12PQ92771 950 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 SNX21Q969T3 373 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 SNX27Q96L92 541 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 USP28Q96RU2 1077 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 PIDD1Q9HB75 910 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 FNIP2Q9P278 1114 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 TBX20Q9UMR3 447 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 VWA8A3KMH1 1905 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 TMEM189-UBE2V1I3L0A0 370 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 I3L4J1 428 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 ABLIM1O14639 778 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 TRAPPC3O43617 180 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 RFPL2O75678 378 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 BRD1O95696 1058 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 IGFBP6P24592 240 aaPredicted RBP10.29□□□□□ -0.76
PDPN-204ENST00000475043 BRCC3P46736 316 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 SOX4Q06945 474 aaPredicted RBP10.29□□□□□ -0.76
PDPN-204ENST00000475043 MCL1Q07820 350 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 SLC39A14Q15043 492 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 STK38Q15208 465 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 E2F4Q16254 413 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 PTPN21Q16825 1174 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 FOXD4L5Q5VV16 416 aaPredicted RBP10.29□□□□□ -0.76
PDPN-204ENST00000475043 PDXDC1Q6P996 788 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 ALKAL1Q6UXT8 129 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 C15orf39Q6ZRI6 1047 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 GPR65Q8IYL9 337 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 KREMEN2Q8NCW0 462 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 C3orf58Q8NDZ4 430 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 LNX1Q8TBB1 728 aaPredicted RBP10.29□□□□□ -0.76
PDPN-204ENST00000475043 FOXD4L4Q8WXT5 416 aaPredicted RBP10.29□□□□□ -0.76
PDPN-204ENST00000475043 PIK3R5Q8WYR1 880 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 SMG7Q92540 1137 aaKnown RBP10.29□□□□□ -0.76
PDPN-204ENST00000475043 C18orf25Q96B23 403 aaPredicted RBP10.29□□□□□ -0.76
PDPN-204ENST00000475043 ACSF2Q96CM8 615 aaPredicted RBP10.29□□□□□ -0.76
PDPN-204ENST00000475043 ZMAT2Q96NC0 199 aaKnown RBP10.29□□□□□ -0.76
PDPN-204ENST00000475043 CLSTN3Q9BQT9 956 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 PANK2Q9BZ23 570 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 PLEKHA4Q9H4M7 779 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 CNTN3Q9P232 1028 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 STK17AQ9UEE5 414 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 NUB1Q9Y5A7 615 aa10.29□□□□□ -0.76
PDPN-204ENST00000475043 TMEM221A6NGB7 291 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 M0R296 226 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 PODXLO00592 558 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 CXCL8P10145 99 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 KCNE1P15382 129 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 SCP2P22307 547 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 NMT1P30419 496 aaKnown RBP10.28□□□□□ -0.76
PDPN-204ENST00000475043 OR1D2P34982 312 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 TNFSF9P41273 254 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 STAT6P42226 847 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 ZNF131P52739 623 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 SPAG1Q07617 926 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 SLC10A6Q3KNW5 377 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 FOXD4L6Q3SYB3 417 aaPredicted RBP10.28□□□□□ -0.76
PDPN-204ENST00000475043 ZC2HC1CQ53FD0 456 aaPredicted RBP10.28□□□□□ -0.76
PDPN-204ENST00000475043 XKR4Q5GH76 650 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 LIN9Q5TKA1 542 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 FOXD4L3Q6VB84 417 aaPredicted RBP10.28□□□□□ -0.76
PDPN-204ENST00000475043 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.28□□□□□ -0.76
PDPN-204ENST00000475043 TRIM67Q6ZTA4 783 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 HFE2Q6ZVN8 426 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 SV2BQ7L1I2 683 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 OTOP3Q7RTS5 596 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 CMASQ8NFW8 434 aaPredicted RBP10.28□□□□□ -0.76
PDPN-204ENST00000475043 HDAC7Q8WUI4 952 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 PBXIP1Q96AQ6 731 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 ZNF396Q96N95 335 aaPredicted RBP10.28□□□□□ -0.76
PDPN-204ENST00000475043 HAPLN2Q9GZV7 340 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 TFIP11Q9UBB9 837 aaKnown RBP10.28□□□□□ -0.76
PDPN-204ENST00000475043 LIMD1Q9UGP4 676 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 USTQ9Y2C2 406 aa10.28□□□□□ -0.76
PDPN-204ENST00000475043 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.77
PDPN-204ENST00000475043 MEFVO15553 781 aaPredicted RBP10.27□□□□□ -0.77
PDPN-204ENST00000475043 ADAM12O43184 909 aa10.27□□□□□ -0.77
PDPN-204ENST00000475043 C1RP00736 705 aa10.27□□□□□ -0.77
PDPN-204ENST00000475043 ASGR2P07307 311 aa10.27□□□□□ -0.77
PDPN-204ENST00000475043 CLTAP09496 248 aa10.27□□□□□ -0.77
PDPN-204ENST00000475043 IDEP14735 1019 aa10.27□□□□□ -0.77
PDPN-204ENST00000475043 FGFR3P22607 806 aa10.27□□□□□ -0.77
PDPN-204ENST00000475043 TKTP29401 623 aaKnown RBP10.27□□□□□ -0.77
PDPN-204ENST00000475043 GBP2P32456 591 aaPredicted RBP10.27□□□□□ -0.77
PDPN-204ENST00000475043 RPL9P32969 192 aaKnown RBP10.27□□□□□ -0.77
PDPN-204ENST00000475043 ABCD1P33897 745 aa10.27□□□□□ -0.77
PDPN-204ENST00000475043 MCM4P33991 863 aa10.27□□□□□ -0.77
PDPN-204ENST00000475043 PPP2R3AQ06190 1150 aa10.27□□□□□ -0.77
PDPN-204ENST00000475043 SIGLEC14Q08ET2 396 aa10.27□□□□□ -0.77
PDPN-204ENST00000475043 MTMR3Q13615 1198 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms