RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 PTPRHQ9HD43 1115 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 WDR6Q9NNW5 1121 aaKnown RBP12.95□□□□□ -0.34
CLIP2-204ENST00000474962 KMT5AQ9NQR1 393 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLIP2-204ENST00000474962 HPSEQ9Y251 543 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 ZMYM2Q9UBW7 1377 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 SF3B1O75533 1304 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLIP2-204ENST00000474962 NPHP3-ACAD11A0A0J9YXS1 232 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 SMIM28A0A1B0GU29 152 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 SLC16A4O15374 487 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 B3GAT3O94766 335 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 CLCNKBP51801 687 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 ASIC1P78348 528 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 TCF15Q12870 199 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 ARSHQ5FYA8 562 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 DCLRE1AQ6PJP8 1040 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 ALKAL1Q6UXT8 129 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 KRBA2Q6ZNG9 492 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 CCDC65Q8IXS2 484 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 GPR65Q8IYL9 337 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 ST13P5Q8NFI4 369 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-204ENST00000474962 LRRC15Q8TF66 581 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 HDAC7Q8WUI4 952 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 RSAD2Q8WXG1 361 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 ZBTB45Q96K62 511 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-204ENST00000474962 PPP1R10Q96QC0 940 aaKnown RBP12.94□□□□□ -0.34
CLIP2-204ENST00000474962 REEP2Q9BRK0 252 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 NTPCRQ9BSD7 190 aaKnown RBP12.94□□□□□ -0.34
CLIP2-204ENST00000474962 TCHPQ9BT92 498 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 GOLPH3LQ9H4A5 285 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 PLEKHA4Q9H4M7 779 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 GOLGA2P5Q9HBQ8 144 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 KBTBD4Q9NVX7 518 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 ARHGAP28Q9P2N2 729 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 DPP7Q9UHL4 492 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 ZFHX2Q9C0A1 2572 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-204ENST00000474962 MYH11P35749 1972 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 CFAP54Q96N23 3096 aa12.94□□□□□ -0.34
CLIP2-204ENST00000474962 MYMKA6NI61 221 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 H0YCG3 227 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 I3L4J1 428 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 C1RP00736 705 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 MYL1P05976 194 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 PLS3P13797 630 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 GAP43P17677 238 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 GBP2P32456 591 aaPredicted RBP12.93□□□□□ -0.34
CLIP2-204ENST00000474962 SOX4Q06945 474 aaPredicted RBP12.93□□□□□ -0.34
CLIP2-204ENST00000474962 TDGQ13569 410 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 UPP1Q16831 310 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 RSPO2Q6UXX9 243 aaPredicted RBP12.93□□□□□ -0.34
CLIP2-204ENST00000474962 CYP26C1Q6V0L0 522 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 PAGE5Q96GU1 130 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 ZMAT2Q96NC0 199 aaKnown RBP12.93□□□□□ -0.34
CLIP2-204ENST00000474962 MYADMQ96S97 322 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 MRPL4Q9BYD3 311 aaKnown RBP12.93□□□□□ -0.34
CLIP2-204ENST00000474962 PRKD2Q9BZL6 878 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 CDT1Q9H211 546 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 PIDD1Q9HB75 910 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 PANK4Q9NVE7 773 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 PLXNA3P51805 1871 aa12.93□□□□□ -0.34
CLIP2-204ENST00000474962 PHLPP2Q6ZVD8 1323 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 ABLIM1O14639 778 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 MEFVO15553 781 aaPredicted RBP12.92□□□□□ -0.34
CLIP2-204ENST00000474962 ACTN4O43707 911 aaKnown RBP12.92□□□□□ -0.34
CLIP2-204ENST00000474962 TRAK2O60296 914 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 ZMYND10O75800 440 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 PAPLNO95428 1278 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 OR1D2P34982 312 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 GRM5P41594 1212 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 MRE11P49959 708 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 PSMD5Q16401 504 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 ZNF568Q3ZCX4 644 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 SEZ6Q53EL9 994 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 XKR4Q5GH76 650 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 ELMSAN1Q6PJG2 1045 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 FMR1NBQ8N0W7 255 aaPredicted RBP12.92□□□□□ -0.34
CLIP2-204ENST00000474962 C3orf58Q8NDZ4 430 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 TMEM161BQ8NDZ6 487 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 PIK3R5Q8WYR1 880 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 TIGD1Q96MW7 591 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 C7orf25Q9BPX7 421 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 RHOBTB2Q9BYZ6 727 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 TRIM9Q9C026 710 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 BLZF1Q9H2G9 400 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 ZDHHC7Q9NXF8 308 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 C2orf16Q68DN1 1984 aa12.92□□□□□ -0.34
CLIP2-204ENST00000474962 FRYLO94915 3013 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 DOCK6Q96HP0 2047 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 CACNA1HO95180 2353 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 NARSO43776 548 aaKnown RBP12.91□□□□□ -0.34
CLIP2-204ENST00000474962 HARSP12081 509 aaKnown RBP12.91□□□□□ -0.34
CLIP2-204ENST00000474962 FGFR3P22607 806 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 PROZP22891 400 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 TKTP29401 623 aaKnown RBP12.91□□□□□ -0.34
CLIP2-204ENST00000474962 ABCD1P33897 745 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 BRCC3P46736 316 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 YARSP54577 528 aaKnown RBP12.91□□□□□ -0.34
CLIP2-204ENST00000474962 NTHL1P78549 312 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 CREMQ03060 361 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 ELAVL2Q12926 359 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms