RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 TPRG1Q6ZUI0 275 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 ATRIPQ8WXE1 791 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 NELL2Q99435 816 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 CDT1Q9H211 546 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 PTPRHQ9HD43 1115 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 AVENQ9NQS1 362 aaPredicted RBP17.13■□□□□ 0.33
SRRT-209ENST00000474896 TOPORSQ9NS56 1045 aaPredicted RBP17.13■□□□□ 0.33
SRRT-209ENST00000474896 DDX19AQ9NUU7 478 aaKnown RBP17.13■□□□□ 0.33
SRRT-209ENST00000474896 LIMCH1Q9UPQ0 1083 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 WDR27A2RRH5 827 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 PODXLO00592 558 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 NCAM2O15394 837 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 CEBPBP17676 345 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 TARSP26639 723 aaKnown RBP17.12■□□□□ 0.33
SRRT-209ENST00000474896 MAGEA9P43362 315 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 NPTX2P47972 431 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
SRRT-209ENST00000474896 PDIA5Q14554 519 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 NBR1Q14596 966 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 PUM1Q14671 1186 aaKnown RBP eCLIP17.12■□□□□ 0.337e-7■□□□□ 8.3
SRRT-209ENST00000474896 ZNF568Q3ZCX4 644 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 ZNF852Q6ZMS4 543 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 CCDC83Q8IWF9 413 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 CLDN23Q96B33 292 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 BORCS6Q96GS4 357 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 ZMAT2Q96NC0 199 aaKnown RBP17.12■□□□□ 0.33
SRRT-209ENST00000474896 CORO1BQ9BR76 489 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 TCHPQ9BT92 498 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 TARS2Q9BW92 718 aaKnown RBP17.12■□□□□ 0.33
SRRT-209ENST00000474896 TMEM134Q9H6X4 195 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 CYP4F11Q9HBI6 524 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 HEBP1Q9NRV9 189 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 SLC38A7Q9NVC3 462 aa17.12■□□□□ 0.33
SRRT-209ENST00000474896 MED19A0JLT2 244 aaPredicted RBP17.11■□□□□ 0.33
SRRT-209ENST00000474896 H7C4K7 107 aa17.11■□□□□ 0.33
SRRT-209ENST00000474896 TBC1D4O60343 1298 aa17.11■□□□□ 0.33
SRRT-209ENST00000474896 SEC24AO95486 1093 aa17.11■□□□□ 0.33
SRRT-209ENST00000474896 ATF2P15336 505 aa17.11■□□□□ 0.33
SRRT-209ENST00000474896 MCM2P49736 904 aa17.11■□□□□ 0.33
SRRT-209ENST00000474896 FBXO18Q8NFZ0 1043 aa17.11■□□□□ 0.33
SRRT-209ENST00000474896 ELSPBP1Q96BH3 223 aa17.11■□□□□ 0.33
SRRT-209ENST00000474896 TCEAL4Q96EI5 215 aa17.11■□□□□ 0.33
SRRT-209ENST00000474896 ACAP3Q96P50 834 aa17.11■□□□□ 0.33
SRRT-209ENST00000474896 MRPL4Q9BYD3 311 aaKnown RBP17.11■□□□□ 0.33
SRRT-209ENST00000474896 DNM3Q9UQ16 869 aa17.11■□□□□ 0.33
SRRT-209ENST00000474896 MRPS17Q9Y2R5 130 aaKnown RBP17.11■□□□□ 0.33
SRRT-209ENST00000474896 E9PMD0 336 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 ZNF197O14709 1029 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 SYN3O14994 580 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 HIP1RO75146 1068 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 KCNE1P15382 129 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 RPL9P32969 192 aaKnown RBP17.1■□□□□ 0.33
SRRT-209ENST00000474896 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 FZD5Q13467 585 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 MRPL58Q14197 206 aaKnown RBP17.1■□□□□ 0.33
SRRT-209ENST00000474896 GRM2Q14416 872 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 PRSS36Q5K4E3 855 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 TSSK4Q6SA08 328 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 TAS1R3Q7RTX0 852 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 TCEAL8Q8IYN2 117 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 DAW1Q8N136 415 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 SNX29Q8TEQ0 813 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 C18orf25Q96B23 403 aaPredicted RBP17.1■□□□□ 0.33
SRRT-209ENST00000474896 ZSCAN31Q96LW9 406 aaPredicted RBP17.1■□□□□ 0.33
SRRT-209ENST00000474896 LLPHQ9BRT6 129 aaKnown RBP17.1■□□□□ 0.33
SRRT-209ENST00000474896 ZFP14Q9HCL3 533 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 KMT5AQ9NQR1 393 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 ZSCAN32Q9NX65 697 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 NCDNQ9UBB6 729 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 FBXL5Q9UKA1 691 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 NOL7Q9UMY1 257 aaKnown RBP17.1■□□□□ 0.33
SRRT-209ENST00000474896 NUB1Q9Y5A7 615 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 PCDHGA2Q9Y5H1 932 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 STK24Q9Y6E0 443 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 GPR179Q6PRD1 2367 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 CACNA1AO00555 2505 aa17.1■□□□□ 0.33
SRRT-209ENST00000474896 SHISA7A6NL88 538 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 SFI1A8K8P3 1242 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 SPTLC1O15269 473 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 MCF2P10911 925 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 RPS9P46781 194 aaKnown RBP17.09■□□□□ 0.33
SRRT-209ENST00000474896 ADCY1Q08828 1119 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 PTGDRQ13258 359 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 DMP1Q13316 513 aaPredicted RBP17.09■□□□□ 0.33
SRRT-209ENST00000474896 RSPO4Q2I0M5 234 aaPredicted RBP17.09■□□□□ 0.33
SRRT-209ENST00000474896 CTXN3Q4LDR2 81 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 FAM78AQ5JUQ0 283 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 IGSF22Q8N9C0 903 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 ZBTB44Q8NCP5 570 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 ZBTB45Q96K62 511 aaPredicted RBP17.09■□□□□ 0.33
SRRT-209ENST00000474896 TRMT61BQ9BVS5 477 aaKnown RBP17.09■□□□□ 0.33
SRRT-209ENST00000474896 ARHGAP28Q9P2N2 729 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 RBM19Q9Y4C8 960 aaKnown RBP17.09■□□□□ 0.33
SRRT-209ENST00000474896 PHLPP2Q6ZVD8 1323 aa17.09■□□□□ 0.33
SRRT-209ENST00000474896 PATJQ8NI35 1801 aa17.08■□□□□ 0.33
SRRT-209ENST00000474896 NRG2O14511 850 aaPredicted RBP17.08■□□□□ 0.32
SRRT-209ENST00000474896 MICAL2O94851 1124 aa17.08■□□□□ 0.32
SRRT-209ENST00000474896 HARSP12081 509 aaKnown RBP17.08■□□□□ 0.32
SRRT-209ENST00000474896 PROZP22891 400 aa17.08■□□□□ 0.32
SRRT-209ENST00000474896 FCARP24071 287 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms