RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CACNB1Q02641 598 aaPredicted RBP22.22■■□□□ 1.15
PDLIM4-206ENST00000474421 SLC10A6Q3KNW5 377 aa22.22■■□□□ 1.15
PDLIM4-206ENST00000474421 SLC44A3Q8N4M1 653 aa22.22■■□□□ 1.15
PDLIM4-206ENST00000474421 MYCT1Q8N699 235 aa22.22■■□□□ 1.15
PDLIM4-206ENST00000474421 TMEM105Q8N8V8 129 aa22.22■■□□□ 1.15
PDLIM4-206ENST00000474421 CDH7Q9ULB5 785 aa22.22■■□□□ 1.15
PDLIM4-206ENST00000474421 POLIQ9UNA4 740 aa22.22■■□□□ 1.15
PDLIM4-206ENST00000474421 ANHXE9PGG2 379 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 CCL16O15467 120 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 PLCG1P19174 1290 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 LIG4P49917 911 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 ZNF131P52739 623 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 DHX8Q14562 1220 aaKnown RBP22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 VARS2Q5ST30 1063 aaKnown RBP22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 SLC8B1Q6J4K2 584 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 SIX5Q8N196 739 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 FLCNQ8NFG4 579 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 ZNF461Q8TAF7 563 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 RSAD2Q8WXG1 361 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 RAD54LQ92698 747 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 C18orf25Q96B23 403 aaPredicted RBP22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 TSPAN18Q96SJ8 248 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 CCSER1Q9C0I3 900 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 BLOC1S4Q9NUP1 217 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 TBX20Q9UMR3 447 aa22.21■■□□□ 1.15
PDLIM4-206ENST00000474421 K7ENM7 598 aa22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 HNRNPDLO14979 420 aaKnown RBP22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 TBCAO75347 108 aaKnown RBP22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 ELF1P32519 619 aa22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 HTR4Q13639 388 aa22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 MCM6Q14566 821 aa22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 KARSQ15046 597 aaKnown RBP22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 RSPO2Q6UXX9 243 aaPredicted RBP22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 APPL2Q8NEU8 664 aa22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 ATOH1Q92858 354 aaPredicted RBP22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 SUSD3Q96L08 255 aa22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 RTP3Q9BQQ7 232 aa22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 KCNH3Q9ULD8 1083 aa22.2■■□□□ 1.14
PDLIM4-206ENST00000474421 MEFVO15553 781 aaPredicted RBP22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 XPOTO43592 962 aaKnown RBP22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 NARSO43776 548 aaKnown RBP22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 TRAK2O60296 914 aa22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 PIGRP01833 764 aa22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 CXCL8P10145 99 aa22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 AOC1P19801 751 aa22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 MCM4P33991 863 aa22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 ROR1Q01973 937 aa22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 PPP2R3AQ06190 1150 aa22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 SEZ6Q53EL9 994 aa22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 MTSS1LQ765P7 747 aa22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 LARP4BQ92615 738 aaKnown RBP22.19■■□□□ 1.14
PDLIM4-206ENST00000474421 TTC26A0AVF1 554 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 ABLIM3O94929 683 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 CFHP08603 1231 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 CYP3A5P20815 502 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 RFX1P22670 979 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 DDIT3P35638 169 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 NTHL1P78549 312 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 GRIN1Q05586 938 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 MRPL58Q14197 206 aaKnown RBP22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 PABPC1LQ4VXU2 614 aaKnown RBP22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 TPGS2Q68CL5 300 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 CWF19L1Q69YN2 538 aaKnown RBP22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 FGF13Q92913 245 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 ZHX3Q9H4I2 956 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 CCDC39Q9UFE4 941 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 MAFFQ9ULX9 164 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 UBQLN1Q9UMX0 589 aaKnown RBP22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 NUMBLQ9Y6R0 609 aa22.18■■□□□ 1.14
PDLIM4-206ENST00000474421 ARHGEF37A1IGU5 675 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 PRRG1O14668 218 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 OGTO15294 1046 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 TBC1D4O60343 1298 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 NPR3P17342 541 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 MARCKSP29966 332 aaPredicted RBP22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 CTXN3Q4LDR2 81 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 ZNF280DQ6N043 979 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 KRI1Q8N9T8 703 aaKnown RBP22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 LRRC15Q8TF66 581 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 KIF12Q96FN5 646 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 INTS4Q96HW7 963 aaKnown RBP22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 HAPLN2Q9GZV7 340 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 RPF1Q9H9Y2 349 aaKnown RBP22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 SLC2A4RGQ9NR83 387 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 TUBGCP4Q9UGJ1 667 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 PCDHB8Q9UN66 801 aa22.17■■□□□ 1.14
PDLIM4-206ENST00000474421 WDR27A2RRH5 827 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 H0Y858 1186 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 STK25O00506 426 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 LRG1P02750 347 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 ATF2P15336 505 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 LRPAP1P30533 357 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 TXLNAP40222 546 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 CD302Q8IX05 232 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 TCEAL8Q8IYN2 117 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 DDX12PQ92771 950 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 PHOX2BQ99453 314 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 OXCT2Q9BYC2 517 aaPredicted RBP22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 AVENQ9NQS1 362 aaPredicted RBP22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 DNMT3BQ9UBC3 853 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms