RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 IFIT1BQ5T764 474 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 FAM102BQ5T8I3 360 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 SPTY2D1Q68D10 685 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 CHPFQ8IZ52 775 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 PRR18Q8N4B5 295 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 C3orf20Q8ND61 904 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 OR2I1PQ8NGU4 316 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 C1GALT1C1Q96EU7 318 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 CEP95Q96GE4 821 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 TMX3Q96JJ7 454 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 PRRX2Q99811 253 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 NDC1Q9BTX1 674 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 LSM14BQ9BX40 385 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 KCNH6Q9H252 994 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 SPON1Q9HCB6 807 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 SLC2A4RGQ9NR83 387 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 SIDT1Q9NXL6 827 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 POGKQ9P215 609 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 LIMCH1Q9UPQ0 1083 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 XDHP47989 1333 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 HAUS5O94927 633 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 ANXA1P04083 346 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 ERBB2P04626 1255 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 HLA-DOAP06340 250 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 HK1P19367 917 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 EDNRBP24530 442 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 SMARCA1P28370 1054 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 ALDH1A3P47895 512 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 MINDY4Q4G0A6 757 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 PABPC1LQ4VXU2 614 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 RABL3Q5HYI8 236 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 ATAT1Q5SQI0 421 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 ZKSCAN2Q63HK3 967 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 TCEAL8Q8IYN2 117 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 REPS2Q8NFH8 660 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 IFI44Q8TCB0 444 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 DPF2Q92785 391 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 RGMAQ96B86 450 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 MVB12AQ96EY5 273 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 CLPTM1LQ96KA5 538 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 MRGPRX4Q96LA9 322 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 SLC46A2Q9BY10 475 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 WDCPQ9H6R7 721 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 RLIMQ9NVW2 624 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 EIF2B4Q9UI10 523 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 SERPINB13Q9UIV8 391 aa4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 THRAP3Q9Y2W1 955 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-213ENST00000474240 H3BML4 177 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 FOXN1O15353 648 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 AMY1AP04745 511 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 GNAI3P08754 354 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 PCSK1P29120 753 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 PTGS2P35354 604 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 SCNN1GP51170 649 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 GNAI1P63096 354 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 TLE1Q04724 770 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 TARDBPQ13148 414 aaKnown RBP eCLIP4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 C3orf36Q3SXR2 165 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 C1QL3Q5VWW1 255 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 ZNF529Q6P280 563 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 Q6ZRM9 215 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 HPS3Q969F9 1004 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 CDK5RAP3Q96JB5 506 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 PACSIN1Q9BY11 444 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 RTFDC1Q9BY42 306 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 CPEB1Q9BZB8 566 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 SIK2Q9H0K1 926 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 CEP72Q9P209 647 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 FEZ2Q9UHY8 353 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 PCDHA13Q9Y5I0 950 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 ACTL7AQ9Y615 435 aa4.23□□□□□ -1.73
ECHDC1-213ENST00000474240 RNASET2O00584 256 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 TSPAN6O43657 245 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 MARCH6O60337 910 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 SCGB1D2O95969 90 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 FTLP02792 175 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 HK3P52790 923 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 RAP2BP61225 183 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 NOGQ13253 232 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 IL10RAQ13651 578 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 TOB2Q14106 344 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 UBXN2BQ14CS0 331 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 SLC4A10Q6U841 1118 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 GDF7Q7Z4P5 450 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 XYLT1Q86Y38 959 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 PDSS2Q86YH6 399 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 RHOT2Q8IXI1 618 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 SYNE4Q8N205 404 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 FITM2Q8N6M3 262 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 MAGEB6Q8N7X4 407 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 IL17RDQ8NFM7 739 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 SLC35B2Q8TB61 432 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 NUP133Q8WUM0 1156 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 ZNF764Q96H86 408 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 CCDC136Q96JN2 1154 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 MED15Q96RN5 788 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 GTPBP4Q9BZE4 634 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 SLC12A5Q9H2X9 1139 aa4.22□□□□□ -1.73
ECHDC1-213ENST00000474240 RNPEPQ9H4A4 650 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms