RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ELSPBP1Q96BH3 223 aa22.23■■□□□ 1.15
APP-215ENST00000474136 TCEAL4Q96EI5 215 aa22.23■■□□□ 1.15
APP-215ENST00000474136 PRIMPOLQ96LW4 560 aa22.23■■□□□ 1.15
APP-215ENST00000474136 NAP1L4Q99733 375 aaKnown RBP22.23■■□□□ 1.15
APP-215ENST00000474136 RAB23Q9ULC3 237 aa22.23■■□□□ 1.15
APP-215ENST00000474136 GDAQ9Y2T3 454 aa22.23■■□□□ 1.15
APP-215ENST00000474136 N4BP3O15049 544 aa22.22■■□□□ 1.15
APP-215ENST00000474136 B3GAT3O94766 335 aa22.22■■□□□ 1.15
APP-215ENST00000474136 EDN1P05305 212 aa22.22■■□□□ 1.15
APP-215ENST00000474136 TMEM132AQ24JP5 1023 aa22.22■■□□□ 1.15
APP-215ENST00000474136 PPM1JQ5JR12 505 aa22.22■■□□□ 1.15
APP-215ENST00000474136 EEF1DP3Q658K8 133 aa22.22■■□□□ 1.15
APP-215ENST00000474136 CDCA2Q69YH5 1023 aaPredicted RBP22.22■■□□□ 1.15
APP-215ENST00000474136 FBXO18Q8NFZ0 1043 aa22.22■■□□□ 1.15
APP-215ENST00000474136 DNASE1L2Q92874 299 aa22.22■■□□□ 1.15
APP-215ENST00000474136 DDX27Q96GQ7 796 aaKnown RBP22.22■■□□□ 1.15
APP-215ENST00000474136 BRD9Q9H8M2 597 aa22.22■■□□□ 1.15
APP-215ENST00000474136 PCDHA12Q9UN75 941 aa22.22■■□□□ 1.15
APP-215ENST00000474136 CFAP47Q6ZTR5 3102 aa22.21■■□□□ 1.15
APP-215ENST00000474136 LIG1P18858 919 aa22.21■■□□□ 1.15
APP-215ENST00000474136 BRCC3P46736 316 aa22.21■■□□□ 1.15
APP-215ENST00000474136 NR5A1Q13285 461 aa22.21■■□□□ 1.15
APP-215ENST00000474136 FAM187BQ17R55 369 aa22.21■■□□□ 1.15
APP-215ENST00000474136 FAM78AQ5JUQ0 283 aa22.21■■□□□ 1.15
APP-215ENST00000474136 PRR23BQ6ZRT6 265 aa22.21■■□□□ 1.15
APP-215ENST00000474136 BSNDQ8WZ55 320 aa22.21■■□□□ 1.15
APP-215ENST00000474136 GOLGA2P5Q9HBQ8 144 aa22.21■■□□□ 1.15
APP-215ENST00000474136 AVENQ9NQS1 362 aaPredicted RBP22.21■■□□□ 1.15
APP-215ENST00000474136 BACE2Q9Y5Z0 518 aa22.21■■□□□ 1.15
APP-215ENST00000474136 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.2■■□□□ 1.14
APP-215ENST00000474136 TMEM189-UBE2V1I3L0A0 370 aa22.2■■□□□ 1.14
APP-215ENST00000474136 SLC30A4O14863 429 aa22.2■■□□□ 1.14
APP-215ENST00000474136 PTPN2P17706 415 aa22.2■■□□□ 1.14
APP-215ENST00000474136 CLCNKBP51801 687 aa22.2■■□□□ 1.14
APP-215ENST00000474136 PRPF4BQ13523 1007 aaKnown RBP22.2■■□□□ 1.14
APP-215ENST00000474136 SAFBQ15424 915 aaKnown RBP eCLIP22.2■■□□□ 1.14
APP-215ENST00000474136 PRSS36Q5K4E3 855 aa22.2■■□□□ 1.14
APP-215ENST00000474136 LAIR1Q6GTX8 287 aa22.2■■□□□ 1.14
APP-215ENST00000474136 RTL10Q7L3V2 364 aa22.2■■□□□ 1.14
APP-215ENST00000474136 ZBTB8OSQ8IWT0 167 aa22.2■■□□□ 1.14
APP-215ENST00000474136 CELF5Q8N6W0 485 aaKnown RBP22.2■■□□□ 1.14
APP-215ENST00000474136 C3orf58Q8NDZ4 430 aa22.2■■□□□ 1.14
APP-215ENST00000474136 NETO1Q8TDF5 533 aa22.2■■□□□ 1.14
APP-215ENST00000474136 CORO1BQ9BR76 489 aa22.2■■□□□ 1.14
APP-215ENST00000474136 TTC12Q9H892 705 aaPredicted RBP22.2■■□□□ 1.14
APP-215ENST00000474136 LMAN1LQ9HAT1 526 aa22.2■■□□□ 1.14
APP-215ENST00000474136 ARHGEF37A1IGU5 675 aa22.19■■□□□ 1.14
APP-215ENST00000474136 MAN2B1O00754 1011 aa22.19■■□□□ 1.14
APP-215ENST00000474136 LRG1P02750 347 aa22.19■■□□□ 1.14
APP-215ENST00000474136 CCR2P41597 374 aa22.19■■□□□ 1.14
APP-215ENST00000474136 NRLP54845 237 aa22.19■■□□□ 1.14
APP-215ENST00000474136 ROR1Q01973 937 aa22.19■■□□□ 1.14
APP-215ENST00000474136 CALCRLQ16602 461 aa22.19■■□□□ 1.14
APP-215ENST00000474136 PPP1R10Q96QC0 940 aaKnown RBP22.19■■□□□ 1.14
APP-215ENST00000474136 TRMT61BQ9BVS5 477 aaKnown RBP22.19■■□□□ 1.14
APP-215ENST00000474136 ZFP14Q9HCL3 533 aa22.19■■□□□ 1.14
APP-215ENST00000474136 CACNA1GO43497 2377 aa22.18■■□□□ 1.14
APP-215ENST00000474136 WNT7AO00755 349 aa22.18■■□□□ 1.14
APP-215ENST00000474136 PRKCBP05771 671 aa22.18■■□□□ 1.14
APP-215ENST00000474136 RETP07949 1114 aa22.18■■□□□ 1.14
APP-215ENST00000474136 TXKP42681 527 aa22.18■■□□□ 1.14
APP-215ENST00000474136 SATB1Q01826 763 aa22.18■■□□□ 1.14
APP-215ENST00000474136 DMWDQ09019 674 aa22.18■■□□□ 1.14
APP-215ENST00000474136 MAMSTRQ6ZN01 415 aa22.18■■□□□ 1.14
APP-215ENST00000474136 ANKS3Q6ZW76 656 aa22.18■■□□□ 1.14
APP-215ENST00000474136 FAM3CQ92520 227 aa22.18■■□□□ 1.14
APP-215ENST00000474136 ZSWIM3Q96MP5 696 aa22.18■■□□□ 1.14
APP-215ENST00000474136 ADPGKQ9BRR6 497 aa22.18■■□□□ 1.14
APP-215ENST00000474136 BRMS1Q9HCU9 246 aa22.18■■□□□ 1.14
APP-215ENST00000474136 ZNF334Q9HCZ1 680 aaPredicted RBP22.18■■□□□ 1.14
APP-215ENST00000474136 ATP6V1DQ9Y5K8 247 aa22.18■■□□□ 1.14
APP-215ENST00000474136 WDR27A2RRH5 827 aa22.17■■□□□ 1.14
APP-215ENST00000474136 VPS37CA5D8V6 355 aaPredicted RBP22.17■■□□□ 1.14
APP-215ENST00000474136 PRRG1O14668 218 aa22.17■■□□□ 1.14
APP-215ENST00000474136 GDF9O60383 454 aa22.17■■□□□ 1.14
APP-215ENST00000474136 SEC24AO95486 1093 aa22.17■■□□□ 1.14
APP-215ENST00000474136 ZSCAN22P10073 491 aaPredicted RBP22.17■■□□□ 1.14
APP-215ENST00000474136 ATP2B1P20020 1258 aa22.17■■□□□ 1.14
APP-215ENST00000474136 GDI1P31150 447 aa22.17■■□□□ 1.14
APP-215ENST00000474136 ARPP19P56211 112 aa22.17■■□□□ 1.14
APP-215ENST00000474136 SRSF5Q13243 272 aaKnown RBP22.17■■□□□ 1.14
APP-215ENST00000474136 GAS6Q14393 721 aa22.17■■□□□ 1.14
APP-215ENST00000474136 MAPK6Q16659 721 aa22.17■■□□□ 1.14
APP-215ENST00000474136 UPP1Q16831 310 aa22.17■■□□□ 1.14
APP-215ENST00000474136 VITQ6UXI7 678 aa22.17■■□□□ 1.14
APP-215ENST00000474136 MAP4K3Q8IVH8 894 aa22.17■■□□□ 1.14
APP-215ENST00000474136 ZNF461Q8TAF7 563 aa22.17■■□□□ 1.14
APP-215ENST00000474136 TNFRSF25Q93038 417 aa22.17■■□□□ 1.14
APP-215ENST00000474136 CHAMP1Q96JM3 812 aa22.17■■□□□ 1.14
APP-215ENST00000474136 ASB16Q96NS5 453 aa22.17■■□□□ 1.14
APP-215ENST00000474136 CCDC113Q9H0I3 377 aa22.17■■□□□ 1.14
APP-215ENST00000474136 ZSCAN16Q9H4T2 348 aaPredicted RBP22.17■■□□□ 1.14
APP-215ENST00000474136 SEMA4GQ9NTN9 838 aa22.17■■□□□ 1.14
APP-215ENST00000474136 PIAS3Q9Y6X2 628 aa22.17■■□□□ 1.14
APP-215ENST00000474136 USP24Q9UPU5 2620 aa22.17■■□□□ 1.14
APP-215ENST00000474136 ACKR2O00590 384 aa22.16■■□□□ 1.14
APP-215ENST00000474136 ABLIM3O94929 683 aa22.16■■□□□ 1.14
APP-215ENST00000474136 SPATA31C1P0DKV0 1188 aa22.16■■□□□ 1.14
APP-215ENST00000474136 XRCC6P12956 609 aaKnown RBP eCLIP22.16■■□□□ 1.14
APP-215ENST00000474136 ELF1P32519 619 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms