RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 TRIM22Q8IYM9 498 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 FAM177A1Q8N128 213 aaPredicted RBP5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 ING5Q8WYH8 240 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 HAS1Q92839 578 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 DYDC2Q96IM9 177 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 AIFM3Q96NN9 605 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 NELL2Q99435 816 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 IRX2Q9BZI1 471 aaPredicted RBP5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 PLA2G2FQ9BZM2 168 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 SLKQ9H2G2 1235 aaPredicted RBP5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 CHRDQ9H2X0 955 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 ZSWIM4Q9H7M6 989 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 HEBP1Q9NRV9 189 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 GDE1Q9NZC3 331 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 DNMT3BQ9UBC3 853 aaKnown RBP5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 GMEB2Q9UKD1 530 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 SNX14Q9Y5W7 946 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 BPTFQ12830 3046 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 VWA8A3KMH1 1905 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 SLC30A4O14863 429 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 TBX3O15119 743 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 LRP3O75074 770 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 RECQL4O94761 1208 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 DEXIO95424 95 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 RHOP08100 348 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 GCFC2P16383 781 aaKnown RBP5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 CEBPBP17676 345 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 GLRA2P23416 452 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 FCARP24071 287 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 OR1D2P34982 312 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 SSRP1Q08945 709 aaKnown RBP5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 SPEM2Q0P670 501 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 ELAVL2Q12926 359 aaKnown RBP5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 CTTNQ14247 550 aaKnown RBP5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 LPAL2Q16609 132 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 PPM1JQ5JR12 505 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 LAIR1Q6GTX8 287 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 NCAPH2Q6IBW4 605 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 TANGO2Q6ICL3 276 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 PDXDC1Q6P996 788 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 NUDT18Q6ZVK8 323 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 NEK8Q86SG6 692 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 SKAP1Q86WV1 359 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 CEP57Q86XR8 500 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 NETO1Q8TDF5 533 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 DNASE1L2Q92874 299 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 ELSPBP1Q96BH3 223 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 CXCL16Q9H2A7 254 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 AVENQ9NQS1 362 aaPredicted RBP5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 MTRRQ9UBK8 725 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 PARP2Q9UGN5 583 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 ANGPTL2Q9UKU9 493 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 RAB23Q9ULC3 237 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 NDRG2Q9UN36 371 aaKnown RBP5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 KCNJ14Q9UNX9 436 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 MRPS17Q9Y2R5 130 aaKnown RBP5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 MRPS23Q9Y3D9 190 aaKnown RBP5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 COL4A2P08572 1712 aa5.68□□□□□ -1.5
SNRNP40-204ENST00000474025 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 CCDC194A0A1B0GVG4 234 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 ARHGEF37A1IGU5 675 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 SOBPA7XYQ1 873 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 TMEM189-UBE2V1I3L0A0 370 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 NRG2O14511 850 aaPredicted RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 CCNT1O60563 726 aaKnown RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 CDC45O75419 566 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 DGAT1O75907 488 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 SLITRK3O94933 977 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 LYPLA2O95372 231 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 THP07101 528 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 RETP07949 1114 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 FGFR3P22607 806 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 IGFBP6P24592 240 aaPredicted RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 HSPA4P34932 840 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 RARRES1P49788 294 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 NRLP54845 237 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 IRX6P78412 446 aaPredicted RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 TOB2Q14106 344 aaPredicted RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 GAS6Q14393 721 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 PPP2R5DQ14738 602 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 FAM187BQ17R55 369 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 PRSS36Q5K4E3 855 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 CDCA2Q69YH5 1023 aaPredicted RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 PRR23CQ6ZRP0 262 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 TPH2Q8IWU9 490 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 CELF5Q8N6W0 485 aaKnown RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 TCEAL4Q96EI5 215 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 MCRS1Q96EZ8 462 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 PRIMPOLQ96LW4 560 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 YTHDC1Q96MU7 727 aaKnown RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 ASB16Q96NS5 453 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 HSD17B14Q9BPX1 270 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 EIF2AK1Q9BQI3 630 aaKnown RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 IER2Q9BTL4 223 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 POLR3FQ9H1D9 316 aaPredicted RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 PDZD7Q9H5P4 517 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 BRD9Q9H8M2 597 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 GPRC5CQ9NQ84 441 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms