RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 LCP1P13796 627 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 BPIP17213 487 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 VCAM1P19320 739 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 LSP1P33241 339 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 ADCYAP1R1P41586 468 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 RECQLP46063 649 aaPredicted RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 LACTBP83111 547 aaPredicted RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 RBM10P98175 930 aaKnown RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 KLF1Q13351 362 aaPredicted RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 FOXE3Q13461 319 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 KIF22Q14807 665 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 MINDY4Q4G0A6 757 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 DDX60LQ5H9U9 1706 aaKnown RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 TBC1D9BQ66K14 1250 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 DENND5AQ6IQ26 1287 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 RCSD1Q6JBY9 416 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 DPY19L2P1Q6NXN4 242 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 ABHD17CQ6PCB6 329 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 CEP68Q76N32 757 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 C16orf59Q7L2K0 433 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 LINC00482Q8N8I6 264 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 KREMEN2Q8NCW0 462 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 RCBTB1Q8NDN9 531 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 TTC8Q8TAM2 541 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 NPLOC4Q8TAT6 608 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 DIS3LQ8TF46 1054 aaKnown RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 SLC5A5Q92911 643 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 ZG16BQ96DA0 208 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 RMDN1Q96DB5 314 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 CLIP3Q96DZ5 547 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 FUBP3Q96I24 572 aaKnown RBP eCLIP2.89□□□□□ -1.95
CALD1-216ENST00000473714 LCORQ96JN0 433 aaPredicted RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 PTCHD1Q96NR3 888 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 LBHD1Q9BQE6 289 aaPredicted RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 MCMBPQ9BTE3 642 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 JAM3Q9BX67 310 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 SLC12A9Q9BXP2 914 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 CELF4Q9BZC1 486 aaKnown RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 TRIM8Q9BZR9 551 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 ARHGAP39Q9C0H5 1083 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 EMC7Q9NPA0 242 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 JADE2Q9NQC1 790 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 DLL4Q9NR61 685 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 C14orf119Q9NWQ9 140 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 OXSMQ9NWU1 459 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 GGA3Q9NZ52 723 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 FBLN5Q9UBX5 448 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 B4GALT6Q9UBX8 382 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 TMEFF2Q9UIK5 374 aaPredicted RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 COG5Q9UP83 839 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 NUB1Q9Y5A7 615 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 ASTN2O75129 1339 aaPredicted RBP2.89□□□□□ -1.95
CALD1-216ENST00000473714 XIRP2A4UGR9 3374 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 LTBP2Q14767 1821 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 USP24Q9UPU5 2620 aa2.89□□□□□ -1.95
CALD1-216ENST00000473714 A0A087X1B8 175 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 PRAMEF22A3QJZ6 481 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 KLHL33A6NCF5 533 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 GPR42O15529 346 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 PPIP5K2O43314 1243 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 ZNF623O75123 536 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 ZNF202O95125 648 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 CAPNS1P04632 268 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 PDE6AP16499 860 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 ATP2A2P16615 1042 aaKnown RBP2.88□□□□□ -1.95
CALD1-216ENST00000473714 HOXD10P28358 340 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 HOXC9P31274 260 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 CYP2C19P33261 490 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 BCL6P41182 706 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 PICALMQ13492 652 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 UBE4AQ14139 1066 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 SLC9A5Q14940 896 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 C9orf50Q5SZB4 431 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 SYCP2LQ5T4T6 812 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 FAM102BQ5T8I3 360 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 BROXQ5VW32 411 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 CYP2R1Q6VVX0 501 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 ARHGAP36Q6ZRI8 547 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 OSTM1Q86WC4 334 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 NME9Q86XW9 330 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 TPH2Q8IWU9 490 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 AMER2Q8N7J2 671 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 TXNDC5Q8NBS9 432 aaKnown RBP2.88□□□□□ -1.95
CALD1-216ENST00000473714 RAET1EQ8TD07 263 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 IGDCC4Q8TDY8 1250 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 DDX11Q96FC9 970 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 TSPAN17Q96FV3 270 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 C1orf159Q96HA4 380 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 FAXDC2Q96IV6 333 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 DEFB118Q96PH6 123 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 MMP19Q99542 508 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 PTPN18Q99952 460 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 SYT3Q9BQG1 590 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 BOCQ9BWV1 1114 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 CDH19Q9H159 772 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 C11orf49Q9H6J7 331 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 PCDH18Q9HCL0 1135 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 MARCH2Q9P0N8 246 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 SAP30BPQ9UHR5 308 aaKnown RBP2.88□□□□□ -1.95
CALD1-216ENST00000473714 SCAF8Q9UPN6 1271 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms