RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 KYNUQ16719 465 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 SGSM1Q2NKQ1 1148 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 ACCSLQ4AC99 568 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 EAPPQ56P03 285 aaPredicted RBP6.5□□□□□ -1.37
HERC4-209ENST00000473533 OTUD6AQ7L8S5 288 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 ANKS1BQ7Z6G8 1248 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 NOP9Q86U38 636 aaKnown RBP6.5□□□□□ -1.37
HERC4-209ENST00000473533 MCF2L2Q86YR7 1114 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 ARHGEF19Q8IW93 802 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 RCOR2Q8IZ40 523 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 RDM1Q8NG50 284 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 GDAP1Q8TB36 358 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 TBC1D22BQ9NU19 505 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 RAB20Q9NX57 234 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 TMOD2Q9NZR1 351 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 ADAM22Q9P0K1 906 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 PSMC3IPQ9P2W1 217 aaPredicted RBP6.5□□□□□ -1.37
HERC4-209ENST00000473533 POLLQ9UGP5 575 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 HERC5Q9UII4 1024 aaKnown RBP6.5□□□□□ -1.37
HERC4-209ENST00000473533 PHTF1Q9UMS5 762 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 SHOC2Q9UQ13 582 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 TM9SF1O15321 606 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 CYP26A1O43174 497 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 CCDC22O60826 627 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 CHRNB2P17787 502 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 MARK3P27448 753 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 RXRBP28702 533 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 CNGA1P29973 690 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 SFNP31947 248 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 JAK3P52333 1124 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 KLC1Q07866 573 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 VPS72Q15906 364 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 AP1ARQ63HQ0 302 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 TRABD2AQ86V40 505 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 DNAAF5Q86Y56 855 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 APBB2Q92870 758 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 DDX23Q9BUQ8 820 aaKnown RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 TMEM117Q9H0C3 514 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 TRABDQ9H4I3 376 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 LRRC4BQ9NT99 713 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 ANKEF1Q9NU02 776 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 DDX56Q9NY93 547 aaKnown RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 CPSF2Q9P2I0 782 aaKnown RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 DRG1Q9Y295 367 aaKnown RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 C2CD2LO14523 706 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 EDF1O60869 148 aaKnown RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 CFBP00751 764 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 PAX7P23759 505 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 QARSP47897 775 aaKnown RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 MARCKSL1P49006 195 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 COG2Q14746 738 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 MUM1Q2TAK8 710 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 LRRC38Q5VT99 294 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 IRGCQ6NXR0 463 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 MIS18BP1Q6P0N0 1132 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 CCDC62Q6P9F0 684 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 HAUS6Q7Z4H7 955 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 CLEC10AQ8IUN9 316 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 ARHGAP18Q8N392 663 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 CCDC24Q8N4L8 307 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 RDH13Q8NBN7 331 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 TTC13Q8NBP0 860 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 SMC1BQ8NDV3 1235 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 C1orf54Q8WWF1 131 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 ERP27Q96DN0 273 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 FAM212AQ96EL1 285 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 RBM15Q96T37 977 aaKnown RBP eCLIP6.49□□□□□ -1.373e-7■■□□□ 13.6
HERC4-209ENST00000473533 MXRA8Q9BRK3 442 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 OSBPL1AQ9BXW6 950 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 DEFB129Q9H1M3 183 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 MMADHCQ9H3L0 296 aaPredicted RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 ANKFY1Q9P2R3 1169 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 IP6K2Q9UHH9 426 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 ZFP69BQ9UJL9 534 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 PRR12Q9ULL5 1215 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 L3MBTL1Q9Y468 752 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 BTAF1O14981 1849 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 KLRG2A4D1S0 409 aaPredicted RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 DNALI1O14645 258 aaPredicted RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 NPTXRO95502 500 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 ASMTLO95671 621 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 KRT5P13647 590 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 VHLP40337 213 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 KCNJ1P48048 391 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 RAD23BP54727 409 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 NCKAP1LP55160 1127 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 PPP3CAQ08209 521 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 DMP1Q13316 513 aaPredicted RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 ECHDC2Q86YB7 292 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 MCOLN2Q8IZK6 566 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 RBBP8NLQ8NC74 664 aaPredicted RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 STMN2Q93045 179 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 GPR101Q96P66 508 aaPredicted RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 NUDCD1Q96RS6 583 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 PCDHB18PQ96TA0 734 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 PAIP2Q9BPZ3 127 aaKnown RBP6.49□□□□□ -1.37
HERC4-209ENST00000473533 OSBPL8Q9BZF1 889 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 UNC45AQ9H3U1 944 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 AAASQ9NRG9 546 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms