RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PLEKHA5Q9HAU0 1116 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 BLOC1S4Q9NUP1 217 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 ANKFY1Q9P2R3 1169 aa16.71■□□□□ 0.27
VTI1A-203ENST00000472892 TRIP11Q15643 1979 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 SYN3O14994 580 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 CCL16O15467 120 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 XYLBO75191 536 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 ZNF131P52739 623 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 NTHL1P78549 312 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 HTR4Q13639 388 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 MRPL58Q14197 206 aaKnown RBP16.7■□□□□ 0.26
VTI1A-203ENST00000472892 SEZ6Q53EL9 994 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 VARS2Q5ST30 1063 aaKnown RBP16.7■□□□□ 0.26
VTI1A-203ENST00000472892 CWF19L1Q69YN2 538 aaKnown RBP16.7■□□□□ 0.26
VTI1A-203ENST00000472892 GPBP1Q86WP2 473 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 ZNF461Q8TAF7 563 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 FBXL21Q9UKT6 434 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 CDH7Q9ULB5 785 aa16.7■□□□□ 0.26
VTI1A-203ENST00000472892 H0Y858 1186 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 HAX1O00165 279 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 ABLIM3O94929 683 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 CLTAP09496 248 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 SRFP11831 508 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 AOC1P19801 751 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 MCM6Q14566 821 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 KARSQ15046 597 aaKnown RBP16.69■□□□□ 0.26
VTI1A-203ENST00000472892 SIX5Q8N196 739 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 MYCT1Q8N699 235 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 FLCNQ8NFG4 579 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 RAD54LQ92698 747 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 ATOH1Q92858 354 aaPredicted RBP16.69■□□□□ 0.26
VTI1A-203ENST00000472892 SUSD3Q96L08 255 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 CCSER1Q9C0I3 900 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 DNMT3BQ9UBC3 853 aaKnown RBP16.69■□□□□ 0.26
VTI1A-203ENST00000472892 TBX20Q9UMR3 447 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 POLIQ9UNA4 740 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 NUB1Q9Y5A7 615 aa16.69■□□□□ 0.26
VTI1A-203ENST00000472892 DOCK8Q8NF50 2099 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 TTC26A0AVF1 554 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 H7C4K7 107 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 PI15O43692 258 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 PIGRP01833 764 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 CFHP08603 1231 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 PLCG1P19174 1290 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 PDCP20941 246 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 DDIT3P35638 169 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 ROR1Q01973 937 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 DHX8Q14562 1220 aaKnown RBP16.68■□□□□ 0.26
VTI1A-203ENST00000472892 PTPAQ15257 358 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 ZBTB6Q15916 424 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 KYAT1Q16773 422 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 FGF13Q92913 245 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 PARVGQ9HBI0 331 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 KCNH3Q9ULD8 1083 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.68■□□□□ 0.26
VTI1A-203ENST00000472892 NUMBLQ9Y6R0 609 aa16.68■□□□□ 0.26
VTI1A-203ENST00000472892 ARHGEF37A1IGU5 675 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 WDR27A2RRH5 827 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 VPS37CA5D8V6 355 aaPredicted RBP16.67■□□□□ 0.26
VTI1A-203ENST00000472892 KRBA1A5PL33 1030 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 TRAK2O60296 914 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 FAM189A1O60320 539 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 FAM13AO94988 1023 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 ADRB2P07550 413 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 CXCL8P10145 99 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 ATF2P15336 505 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 LRPAP1P30533 357 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 MATR3P43243 847 aaKnown RBP eCLIP16.67■□□□□ 0.26
VTI1A-203ENST00000472892 PARM1Q6UWI2 310 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 TCEAL8Q8IYN2 117 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 ITFG1Q8TB96 612 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 BICD1Q96G01 975 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 TSPAN18Q96SJ8 248 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 FIZ1Q96SL8 496 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 RTP3Q9BQQ7 232 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 RPP25Q9BUL9 199 aaKnown RBP16.67■□□□□ 0.26
VTI1A-203ENST00000472892 SLC2A4RGQ9NR83 387 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 FAM86C1Q9NVL1 165 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 HCFC1R1Q9NWW0 138 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 TUBGCP4Q9UGJ1 667 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 FBXL5Q9UKA1 691 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 CLIC4Q9Y696 253 aa16.67■□□□□ 0.26
VTI1A-203ENST00000472892 KRT18P05783 430 aaKnown RBP16.66■□□□□ 0.26
VTI1A-203ENST00000472892 CYP3A5P20815 502 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 TNFSF9P41273 254 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 LIG4P49917 911 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 GTF2BQ00403 316 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 PABPC1LQ4VXU2 614 aaKnown RBP16.66■□□□□ 0.26
VTI1A-203ENST00000472892 TPGS2Q68CL5 300 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 APPL2Q8NEU8 664 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 ST13P5Q8NFI4 369 aaPredicted RBP16.66■□□□□ 0.26
VTI1A-203ENST00000472892 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 GPR152Q8TDT2 470 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 LARP4BQ92615 738 aaKnown RBP16.66■□□□□ 0.26
VTI1A-203ENST00000472892 DDX12PQ92771 950 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 FGF14Q92915 247 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 EPSTI1Q96J88 318 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 AVENQ9NQS1 362 aaPredicted RBP16.66■□□□□ 0.26
VTI1A-203ENST00000472892 UBQLN1Q9UMX0 589 aaKnown RBP16.66■□□□□ 0.26
VTI1A-203ENST00000472892 PCDHB8Q9UN66 801 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms