RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 CDHR5Q9HBB8 845 aa15.71■□□□□ 0.11
HIF3A-206ENST00000472815 INTUQ9ULD6 942 aa15.71■□□□□ 0.11
HIF3A-206ENST00000472815 DERAQ9Y315 318 aa15.71■□□□□ 0.11
HIF3A-206ENST00000472815 FRMPD3Q5JV73 1810 aa15.71■□□□□ 0.11
HIF3A-206ENST00000472815 LACTBL1A8MY62 500 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 ZNF263O14978 683 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 ASS1P00966 412 aaKnown RBP15.71■□□□□ 0.1
HIF3A-206ENST00000472815 FGFR4P22455 802 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 HOXA11P31270 313 aaPredicted RBP15.71■□□□□ 0.1
HIF3A-206ENST00000472815 CUL2Q13617 745 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 ITGA7Q13683 1181 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 TMEM132DQ14C87 1099 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 PTGISQ16647 500 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 ZNF569Q5MCW4 686 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 FBXO46Q6PJ61 603 aaPredicted RBP15.71■□□□□ 0.1
HIF3A-206ENST00000472815 GPIHBP1Q8IV16 184 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 RNF10Q8N5U6 811 aaKnown RBP15.71■□□□□ 0.1
HIF3A-206ENST00000472815 ALS2CR12Q96Q35 445 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 PI4K2AQ9BTU6 479 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 NAGPAQ9UK23 515 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 CDY2AQ9Y6F7 541 aa15.71■□□□□ 0.1
HIF3A-206ENST00000472815 CTAGE9A4FU28 777 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 KBTBD13C9JR72 458 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 CAND2O75155 1236 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 TACC1O75410 805 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 PNMA6AP0CW24 399 aaPredicted RBP15.7■□□□□ 0.1
HIF3A-206ENST00000472815 KRT5P13647 590 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 P4HA1P13674 534 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 ATICP31939 592 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 PTK7Q13308 1070 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 TUBB2AQ13885 445 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 IFI16Q16666 785 aaKnown RBP15.7■□□□□ 0.1
HIF3A-206ENST00000472815 ZNF699Q32M78 642 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 ZNF677Q86XU0 584 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 HACE1Q8IYU2 909 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 TRIM58Q8NG06 486 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 TATDN2Q93075 761 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 AGPAT1Q99943 283 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 TUBB2BQ9BVA1 445 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.7■□□□□ 0.1
HIF3A-206ENST00000472815 ITGA11Q9UKX5 1188 aa15.7■□□□□ 0.1
HIF3A-206ENST00000472815 XPOTO43592 962 aaKnown RBP15.69■□□□□ 0.1
HIF3A-206ENST00000472815 RPS6KA5O75582 802 aa15.69■□□□□ 0.1
HIF3A-206ENST00000472815 SLC10A6Q3KNW5 377 aa15.69■□□□□ 0.1
HIF3A-206ENST00000472815 JADE1Q6IE81 842 aa15.69■□□□□ 0.1
HIF3A-206ENST00000472815 EFCAB13Q8IY85 973 aa15.69■□□□□ 0.1
HIF3A-206ENST00000472815 NIF3L1Q9GZT8 377 aa15.69■□□□□ 0.1
HIF3A-206ENST00000472815 CHST12Q9NRB3 414 aa15.69■□□□□ 0.1
HIF3A-206ENST00000472815 SEPT11Q9NVA2 429 aaKnown RBP15.69■□□□□ 0.1
HIF3A-206ENST00000472815 BTNL10A8MVZ5 291 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 GPR182O15218 404 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 KRT19P08727 400 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 H2AFZP0C0S5 128 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 TWF2Q6IBS0 349 aaKnown RBP15.68■□□□□ 0.1
HIF3A-206ENST00000472815 H2AFVQ71UI9 128 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 TMEM192Q8IY95 271 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 TMEM40Q8WWA1 233 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 KAT5Q92993 513 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 NOX5Q96PH1 765 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 LACRTQ9GZZ8 138 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 FAM124BQ9H5Z6 455 aaPredicted RBP15.68■□□□□ 0.1
HIF3A-206ENST00000472815 PCDHB2Q9Y5E7 798 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 MACROD2A1Z1Q3 448 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 CYP26A1O43174 497 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 NFICP08651 508 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 THPOP40225 353 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 NAP1L1P55209 391 aaKnown RBP15.68■□□□□ 0.1
HIF3A-206ENST00000472815 MYL6P60660 151 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 ZNF667Q5HYK9 610 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 LHX8Q68G74 356 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 GLYCTKQ8IVS8 523 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 SLC30A5Q8TAD4 765 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 EPS8L1Q8TE68 723 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 U2AF1L4Q8WU68 220 aaKnown RBP15.68■□□□□ 0.1
HIF3A-206ENST00000472815 KIF12Q96FN5 646 aa15.68■□□□□ 0.1
HIF3A-206ENST00000472815 NAPGQ99747 312 aaPredicted RBP15.68■□□□□ 0.1
HIF3A-206ENST00000472815 SENP6Q9GZR1 1112 aaPredicted RBP15.68■□□□□ 0.1
HIF3A-206ENST00000472815 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.68■□□□□ 0.1
HIF3A-206ENST00000472815 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.68■□□□□ 0.1
HIF3A-206ENST00000472815 A0A0U1RQG5 324 aaPredicted RBP15.67■□□□□ 0.1
HIF3A-206ENST00000472815 A0A0U1RQJ8 604 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 DDX3XO00571 662 aaKnown RBP eCLIP15.67■□□□□ 0.1
HIF3A-206ENST00000472815 CYP11B1P15538 503 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 RBP5P82980 135 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 PPP1R2P3Q6NXS1 205 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 FAM228AQ86W67 206 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 SLC35F6Q8N357 371 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 TTC39CQ8N584 583 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 USP38Q8NB14 1042 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 BEST2Q8NFU1 509 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 ATRIPQ8WXE1 791 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 CTNNBL1Q8WYA6 563 aaPredicted RBP15.67■□□□□ 0.1
HIF3A-206ENST00000472815 CALR3Q96L12 384 aaKnown RBP15.67■□□□□ 0.1
HIF3A-206ENST00000472815 SNX27Q96L92 541 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 WDR24Q96S15 920 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 SYT11Q9BT88 431 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 IRX2Q9BZI1 471 aaPredicted RBP15.67■□□□□ 0.1
HIF3A-206ENST00000472815 STARD7Q9NQZ5 370 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 SNTG2Q9NY99 539 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 NUB1Q9Y5A7 615 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms