RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 UBQLN1Q9UMX0 589 aaKnown RBP21.17■□□□□ 0.98
COMMD1-208ENST00000472729 MYMKA6NI61 221 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 C2CD4DB7Z1M9 353 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 H7C4K7 107 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 OR1D2P34982 312 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 BRCC3P46736 316 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 SOX4Q06945 474 aaPredicted RBP21.16■□□□□ 0.98
COMMD1-208ENST00000472729 PTPN21Q16825 1174 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 PPM1LQ5SGD2 360 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 APPL2Q8NEU8 664 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 POMGNT1Q8WZA1 660 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 ACCSQ96QU6 501 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 CLSTN3Q9BQT9 956 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 PANK4Q9NVE7 773 aa21.16■□□□□ 0.98
COMMD1-208ENST00000472729 A0A0B4J269 797 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 I3L4J1 428 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 SYN3O14994 580 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 XYLBO75191 536 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 RFPL2O75678 378 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 TKTP29401 623 aaKnown RBP21.15■□□□□ 0.98
COMMD1-208ENST00000472729 GBP2P32456 591 aaPredicted RBP21.15■□□□□ 0.98
COMMD1-208ENST00000472729 ELF1P32519 619 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 ZXDAP98168 799 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 SPAG1Q07617 926 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 MTMR3Q13615 1198 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 ALCAMQ13740 583 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 BEST2Q8NFU1 509 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 DHX58Q96C10 678 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 MFSD14AQ96MC6 490 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 LIMD1Q9UGP4 676 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 POLIQ9UNA4 740 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 CDY1Q9Y6F8 540 aa21.15■□□□□ 0.98
COMMD1-208ENST00000472729 TTC26A0AVF1 554 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 LACTBL1A8MY62 500 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 CYP3A5P20815 502 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 TNFSF9P41273 254 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 ARPP19P56211 112 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 LILRA6Q6PI73 481 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 TRIM67Q6ZTA4 783 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 ZDHHC14Q8IZN3 488 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 PRKD2Q9BZL6 878 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 TNMDQ9H2S6 317 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 MTRRQ9UBK8 725 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 AGO2Q9UKV8 859 aaKnown RBP21.14■□□□□ 0.97
COMMD1-208ENST00000472729 BACE2Q9Y5Z0 518 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 ATG2AQ2TAZ0 1938 aa21.14■□□□□ 0.97
COMMD1-208ENST00000472729 ZMYND10O75800 440 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 C8AP07357 584 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 HNRNPA1P09651 372 aaKnown RBP eCLIP21.13■□□□□ 0.97
COMMD1-208ENST00000472729 RAB33AQ14088 237 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 DSTYKQ6XUX3 929 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 USP37Q86T82 979 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 C3orf58Q8NDZ4 430 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 PYM1Q9BRP8 204 aaKnown RBP21.13■□□□□ 0.97
COMMD1-208ENST00000472729 RHOBTB2Q9BYZ6 727 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 HAPLN2Q9GZV7 340 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 TMEM206Q9H813 350 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 WDR6Q9NNW5 1121 aaKnown RBP21.13■□□□□ 0.97
COMMD1-208ENST00000472729 C11orf16Q9NQ32 467 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 TUBGCP4Q9UGJ1 667 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 SORCS3Q9UPU3 1222 aa21.13■□□□□ 0.97
COMMD1-208ENST00000472729 ACOT2P49753 483 aa21.12■□□□□ 0.97
COMMD1-208ENST00000472729 ENOX2Q16206 610 aaKnown RBP21.12■□□□□ 0.97
COMMD1-208ENST00000472729 UVSSAQ2YD98 709 aa21.12■□□□□ 0.97
COMMD1-208ENST00000472729 CTXN3Q4LDR2 81 aa21.12■□□□□ 0.97
COMMD1-208ENST00000472729 VARS2Q5ST30 1063 aaKnown RBP21.12■□□□□ 0.97
COMMD1-208ENST00000472729 AXDND1Q5T1B0 1012 aaPredicted RBP21.12■□□□□ 0.97
COMMD1-208ENST00000472729 L1TD1Q5T7N2 865 aaKnown RBP21.12■□□□□ 0.97
COMMD1-208ENST00000472729 SUGP1Q8IWZ8 645 aaKnown RBP21.12■□□□□ 0.97
COMMD1-208ENST00000472729 UBALD2Q8IYN6 164 aa21.12■□□□□ 0.97
COMMD1-208ENST00000472729 PBXIP1Q96AQ6 731 aa21.12■□□□□ 0.97
COMMD1-208ENST00000472729 FIZ1Q96SL8 496 aa21.12■□□□□ 0.97
COMMD1-208ENST00000472729 OLFML3Q9NRN5 406 aa21.12■□□□□ 0.97
COMMD1-208ENST00000472729 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.12■□□□□ 0.97
COMMD1-208ENST00000472729 FBXW11Q9UKB1 542 aa21.12■□□□□ 0.97
COMMD1-208ENST00000472729 CPSF3Q9UKF6 684 aaKnown RBP21.12■□□□□ 0.97
COMMD1-208ENST00000472729 ATP6V1DQ9Y5K8 247 aa21.12■□□□□ 0.97
COMMD1-208ENST00000472729 CLUHO75153 1309 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 A0A087X0B3 334 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 ARHGEF37A1IGU5 675 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 TMEM221A6NGB7 291 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 ANKRD63C9JTQ0 380 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 M0R296 226 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 PRRG1O14668 218 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 ASIC1P78348 528 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 SIGLEC14Q08ET2 396 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 TMEM132DQ14C87 1099 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 ZNF280DQ6N043 979 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 RTL10Q7L3V2 364 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 SLC7A14Q8TBB6 771 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 NOC3LQ8WTT2 800 aaKnown RBP21.11■□□□□ 0.97
COMMD1-208ENST00000472729 DNAJC19Q96DA6 116 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 SUSD3Q96L08 255 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 ASB7Q9H672 318 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 MAGEF1Q9HAY2 307 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 DERAQ9Y315 318 aa21.11■□□□□ 0.97
COMMD1-208ENST00000472729 LDHAP00338 332 aaKnown RBP21.1■□□□□ 0.97
COMMD1-208ENST00000472729 PAX3P23760 479 aa21.1■□□□□ 0.97
COMMD1-208ENST00000472729 LRPAP1P30533 357 aa21.1■□□□□ 0.97
COMMD1-208ENST00000472729 DNM1Q05193 864 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms