RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 WASHC2AQ641Q2 1341 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 WNT10BO00744 389 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 PRSS23O95084 383 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 IGLV2-14P01704 120 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 CNGA1P29973 690 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 GPR3P46089 330 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 SIM1P81133 766 aaPredicted RBP4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 SCAPQ12770 1279 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 CYP2A13Q16696 494 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 ARHGEF25Q86VW2 580 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 NLGN4YQ8NFZ3 816 aaPredicted RBP4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 WDR66Q8TBY9 1149 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 ZNF384Q8TF68 577 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 NUP133Q8WUM0 1156 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 MED15Q96RN5 788 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 C7orf25Q9BPX7 421 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 HEPHQ9BQS7 1158 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 LRFN3Q9BTN0 628 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 FBXO34Q9NWN3 711 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 USP25Q9UHP3 1055 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 SIK3Q9Y2K2 1263 aa4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 TMA7Q9Y2S6 64 aaKnown RBP4.73□□□□□ -1.65
PRPF40A-207ENST00000471701 TCRBV7S2A1N4TA0A589 114 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 KIAA0391O15091 583 aaKnown RBP4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 ORC4O43929 436 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 GPR32O75388 356 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 OSMP13725 252 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 FPR1P21462 350 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 VAV2P52735 878 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 MGAT2Q10469 447 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 COLEC12Q5KU26 742 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 AMOTL1Q8IY63 956 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 AFAP1L2Q8N4X5 818 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 TBC1D15Q8TC07 691 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 HOXB13Q92826 284 aaPredicted RBP4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 NACC2Q96BF6 587 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 UNKLQ9H9P5 680 aaKnown RBP4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 USP35Q9P2H5 1018 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 SLC23A1Q9UHI7 598 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 RUVBL1Q9Y265 456 aaKnown RBP4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 KAT6AQ92794 2004 aa4.72□□□□□ -1.65
PRPF40A-207ENST00000471701 TRGV11A0A075B6L2 103 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 PEX1O43933 1283 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 PRKD3O94806 890 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 DDCP20711 480 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 CACNA2D1P54289 1103 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 SEPT2Q15019 361 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 RNF219Q5W0B1 726 aaPredicted RBP4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 PPM1NQ8N819 430 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 FAM98AQ8NCA5 519 aaKnown RBP4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 ATL2Q8NHH9 583 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 ACTRT2Q8TDY3 377 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 PRDM13Q9H4Q3 707 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 SEMA4GQ9NTN9 838 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 SLC17A6Q9P2U8 582 aa4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 MYBBP1AQ9BQG0 1328 aaKnown RBP4.71□□□□□ -1.66
PRPF40A-207ENST00000471701 CCDC78A2IDD5 438 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 EYA4O95677 639 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 PCSK1P29120 753 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 SLC6A9P48067 706 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 MTNR1BP49286 362 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 NOMO3P69849 1222 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 NOMO2Q5JPE7 1267 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 ZNF362Q5T0B9 420 aaPredicted RBP4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 AKNAD1Q5T1N1 836 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 SP5Q6BEB4 398 aaPredicted RBP4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 SDE2Q6IQ49 451 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 SPATS2Q86XZ4 545 aaKnown RBP4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 RHOT1Q8IXI2 618 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 LNX2Q8N448 690 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 SLC2A13Q96QE2 648 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 CCM2LQ9NUG4 571 aaPredicted RBP4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 KCTD5Q9NXV2 234 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 FOXJ2Q9P0K8 574 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 SAP30BPQ9UHR5 308 aaKnown RBP4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 INTUQ9ULD6 942 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 GPR45Q9Y5Y3 372 aa4.7□□□□□ -1.66
PRPF40A-207ENST00000471701 SETD1BQ9UPS6 1966 aaKnown RBP4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 CDHR4A6H8M9 788 aa4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 GPR39O43194 453 aa4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 AMY1AP04745 511 aa4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 FOLR3P41439 243 aa4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 FPGSQ05932 587 aa4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 MTM1Q13496 603 aa4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 CLUL1Q15846 466 aa4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 RSPH3Q86UC2 560 aa4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 DPF2Q92785 391 aa4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 PDLIM2Q96JY6 352 aa4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 C11orf54Q9H0W9 315 aaPredicted RBP4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 ALG13Q9NP73 1137 aaKnown RBP4.69□□□□□ -1.66
PRPF40A-207ENST00000471701 CCDC151A5D8V7 595 aa4.68□□□□□ -1.66
PRPF40A-207ENST00000471701 MTHFD1P11586 935 aaKnown RBP4.68□□□□□ -1.66
PRPF40A-207ENST00000471701 ATXN1P54253 815 aaKnown RBP4.68□□□□□ -1.66
PRPF40A-207ENST00000471701 CTXN1P60606 82 aa4.68□□□□□ -1.66
PRPF40A-207ENST00000471701 GEN1Q17RS7 908 aa4.68□□□□□ -1.66
PRPF40A-207ENST00000471701 KAZNQ674X7 775 aa4.68□□□□□ -1.66
PRPF40A-207ENST00000471701 KRT26Q7Z3Y9 468 aa4.68□□□□□ -1.66
PRPF40A-207ENST00000471701 GRASPQ7Z6J2 395 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms