RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 KIAA2013Q8IYS2 634 aa10.07□□□□□ -0.8
CPSF4-211ENST00000471455 GSTCDQ8NEC7 633 aa10.07□□□□□ -0.8
CPSF4-211ENST00000471455 NELL2Q99435 816 aa10.07□□□□□ -0.8
CPSF4-211ENST00000471455 TTC12Q9H892 705 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-211ENST00000471455 SPATA6Q9NWH7 488 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-211ENST00000471455 MIOSQ9NXC5 875 aa10.07□□□□□ -0.8
CPSF4-211ENST00000471455 KLK14Q9P0G3 267 aa10.07□□□□□ -0.8
CPSF4-211ENST00000471455 DLGAP2Q9P1A6 1054 aa10.07□□□□□ -0.8
CPSF4-211ENST00000471455 ORC3Q9UBD5 711 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-211ENST00000471455 POLIQ9UNA4 740 aa10.07□□□□□ -0.8
CPSF4-211ENST00000471455 MRPS17Q9Y2R5 130 aaKnown RBP10.07□□□□□ -0.8
CPSF4-211ENST00000471455 MIA3Q5JRA6 1907 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 CASTOR2A6NHX0 329 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 TRAPPC3O43617 180 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 PFKFB2O60825 505 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 KIF4AO95239 1232 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 F12P00748 615 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-211ENST00000471455 PRKCSHP14314 528 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-211ENST00000471455 GPC5P78333 572 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 PRPF4BQ13523 1007 aaKnown RBP10.06□□□□□ -0.8
CPSF4-211ENST00000471455 UBXN2BQ14CS0 331 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 PPP2R5AQ15172 486 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 FAM187BQ17R55 369 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 DCAF4L1Q3SXM0 396 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 PABPC1LQ4VXU2 614 aaKnown RBP10.06□□□□□ -0.8
CPSF4-211ENST00000471455 CDCA2Q69YH5 1023 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-211ENST00000471455 PRSS55Q6UWB4 352 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-211ENST00000471455 Q6ZNB5 142 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 ERMNQ8TAM6 284 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 SLC7A14Q8TBB6 771 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 HASPINQ8TF76 798 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 ATRIPQ8WXE1 791 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 FGF13Q92913 245 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 RMDN1Q96DB5 314 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 UROC1Q96N76 676 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 FOXQ1Q9C009 403 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 TUFT1Q9NNX1 390 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 NCDNQ9UBB6 729 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 PCDHGA2Q9Y5H1 932 aa10.06□□□□□ -0.8
CPSF4-211ENST00000471455 TMEM189-UBE2V1I3L0A0 370 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 ZBTB39O15060 712 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 CCL16O15467 120 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 RECQL4O94761 1208 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 ATP2B1P20020 1258 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 TXKP42681 527 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 RBM25P49756 843 aaKnown RBP10.05□□□□□ -0.8
CPSF4-211ENST00000471455 FOXC1Q12948 553 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 SNW1Q13573 536 aaKnown RBP10.05□□□□□ -0.8
CPSF4-211ENST00000471455 RAB33AQ14088 237 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 PPP2R5DQ14738 602 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 AXDND1Q5T1B0 1012 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-211ENST00000471455 PARM1Q6UWI2 310 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 ANKS3Q6ZW76 656 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 CDR2LQ86X02 465 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-211ENST00000471455 DEPTORQ8TB45 409 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 LNX1Q8TBB1 728 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-211ENST00000471455 PIGOQ8TEQ8 1089 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 FGF14Q92915 247 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 NACC1Q96RE7 527 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 CLSTN3Q9BQT9 956 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 DDX23Q9BUQ8 820 aaKnown RBP10.05□□□□□ -0.8
CPSF4-211ENST00000471455 FZD8Q9H461 694 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 PDZD7Q9H5P4 517 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 EVA1BQ9NVM1 165 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 GDE1Q9NZC3 331 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 FANCMQ8IYD8 2048 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 NCOR2Q9Y618 2525 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 PHLPP2Q6ZVD8 1323 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 CACNA1IQ9P0X4 2223 aa10.05□□□□□ -0.8
CPSF4-211ENST00000471455 GPR179Q6PRD1 2367 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 MYH15Q9Y2K3 1946 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 ARHGEF35A5YM69 484 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 ACKR2O00590 384 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 ECI2O75521 394 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 B3GAT3O94766 335 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 CD2BP2O95400 341 aaKnown RBP10.04□□□□□ -0.8
CPSF4-211ENST00000471455 PRKCBP05771 671 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 NAMPTP43490 491 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 EFNA5P52803 228 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 NR5A1Q13285 461 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 ORC2Q13416 577 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-211ENST00000471455 SAFBQ15424 915 aaKnown RBP eCLIP10.04□□□□□ -0.8
CPSF4-211ENST00000471455 SLC44A4Q53GD3 710 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 ZBTB41Q5SVQ8 909 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 HAUS3Q68CZ6 603 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 ZNF852Q6ZMS4 543 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 NPAS3Q8IXF0 933 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 RABGGTAQ92696 567 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 DNASE1L2Q92874 299 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 IFT74Q96LB3 600 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 IER2Q9BTL4 223 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 FAM126AQ9BYI3 521 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-211ENST00000471455 LTB4R2Q9NPC1 389 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 TOPORSQ9NS56 1045 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-211ENST00000471455 ZSCAN32Q9NX65 697 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 TOR4AQ9NXH8 423 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 SNTG2Q9NY99 539 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 MAP10Q9P2G4 905 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 MTRRQ9UBK8 725 aa10.04□□□□□ -0.8
CPSF4-211ENST00000471455 MRPS23Q9Y3D9 190 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms