RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 ACAD11Q709F0 780 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 KRT27Q7Z3Y8 459 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 CATIPQ7Z7H3 387 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 NT5DC3Q86UY8 548 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 LRRC6Q86X45 466 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 SLC7A5P1Q8MH63 180 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 ERMNQ8TAM6 284 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 SEC14L1Q92503 715 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 KCNN1Q92952 543 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 CLPTM1LQ96KA5 538 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 USB1Q9BQ65 265 aaKnown RBP4.48□□□□□ -1.69
VPS50-210ENST00000471188 MRPL1Q9BYD6 325 aaKnown RBP4.48□□□□□ -1.69
VPS50-210ENST00000471188 USP29Q9HBJ7 922 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 FAIMQ9NVQ4 179 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 NAGPAQ9UK23 515 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 HBS1LQ9Y450 684 aaKnown RBP4.48□□□□□ -1.69
VPS50-210ENST00000471188 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.48□□□□□ -1.69
VPS50-210ENST00000471188 DLC1Q96QB1 1528 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 TOPAZ1Q8N9V7 1692 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 C4AP0C0L4 1744 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 C4BP0C0L5 1744 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 TNS1Q9HBL0 1735 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 PODXLO00592 558 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 HNRNPCL1O60812 293 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 ZBED4O75132 1171 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 OXSR1O95747 527 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 TTLL1O95922 423 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PHBP35232 272 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 SERPINB6P35237 376 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PPP1R2P41236 205 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 RPL5P46777 297 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 HIRAP54198 1017 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 RELAQ04206 551 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PDK3Q15120 406 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 CYTH1Q15438 398 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 TRIP10Q15642 601 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 INAQ16352 499 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 NADK2Q4G0N4 442 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PKDCCQ504Y2 493 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ZNF362Q5T0B9 420 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 LPCAT4Q643R3 524 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PPP1R2P3Q6NXS1 205 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 IYDQ6PHW0 289 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 RAPH1Q70E73 1250 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ZNF571Q7Z3V5 609 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 IFNL3Q8IZI9 196 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 SIX5Q8N196 739 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 LRRC57Q8N9N7 239 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 KIAA0895Q8NCT3 520 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 CCDC110Q8TBZ0 833 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 SLC26A7Q8TE54 656 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 DIS3LQ8TF46 1054 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 EMID1Q96A84 441 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 SHISA4Q96DD7 197 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 SNX27Q96L92 541 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 C9orf72Q96LT7 481 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 NUP85Q9BW27 656 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 OSBPL10Q9BXB5 764 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 EDEM3Q9BZQ6 932 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ZHX3Q9H4I2 956 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ARMC7Q9H6L4 198 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ARMT1Q9H993 441 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 TRPC7Q9HCX4 862 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ALG13Q9NP73 1137 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 FBXO6Q9NRD1 293 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 STK32BQ9NY57 414 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 TAS2R1Q9NYW7 299 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 GRHL1Q9NZI5 618 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ARMCX1Q9P291 453 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 APPL1Q9UKG1 709 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 RABL2BQ9UNT1 228 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 NAALADL1Q9UQQ1 740 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ITM2BQ9Y287 266 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PNPLA7Q6ZV29 1317 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 BCL9LQ86UU0 1499 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 FMN2Q9NZ56 1722 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 C15orf38-AP3S2A0A0A6YYH1 394 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ADCY6O43306 1168 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 CDH16O75309 829 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 TRMUO75648 421 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 ENO1P06733 434 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 PDGFRBP09619 1106 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 VCLP18206 1134 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PCSK6P29122 969 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PIK3CAP42336 1068 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 CHN2P52757 468 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 WDR4P57081 412 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 POU5F1Q01860 360 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 MAP3K10Q02779 954 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 KDSRQ06136 332 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 DLG1Q12959 904 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ATP1A4Q13733 1029 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 CTTNQ14247 550 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 TXNRD1Q16881 649 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PDCD4Q53EL6 469 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 SLC45A4Q5BKX6 768 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 IFIT1BQ5T764 474 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 RIPOR1Q6ZS17 1223 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 TRMT10CQ7L0Y3 403 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 ARPINQ7Z6K5 226 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms