RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 CNTN3Q9P232 1028 aa9.6□□□□□ -0.87
LMCD1-207ENST00000470776 ARHGAP20Q9P2F6 1191 aa9.6□□□□□ -0.87
LMCD1-207ENST00000470776 BZW2Q9Y6E2 419 aaKnown RBP9.6□□□□□ -0.87
LMCD1-207ENST00000470776 FRMPD3Q5JV73 1810 aa9.6□□□□□ -0.87
LMCD1-207ENST00000470776 F8VZ95 297 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 PITPNM1O00562 1244 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 LCA5LO95447 670 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 ASS1P00966 412 aaKnown RBP9.59□□□□□ -0.87
LMCD1-207ENST00000470776 CST3P01034 146 aaPredicted RBP9.59□□□□□ -0.87
LMCD1-207ENST00000470776 TNNC2P02585 160 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 TFRCP02786 760 aaKnown RBP9.59□□□□□ -0.87
LMCD1-207ENST00000470776 SERPING1P05155 500 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 NFICP08651 508 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 SELPP16109 830 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 FERP16591 822 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 ANXA13P27216 316 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 SOX5P35711 763 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 STAT1P42224 750 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 RAB27AP51159 221 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 OSTNP61366 133 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 FAM189BP81408 668 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 NFX1Q12986 1120 aaKnown RBP9.59□□□□□ -0.87
LMCD1-207ENST00000470776 NCOA4Q13772 614 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 TUBB2AQ13885 445 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 MBTPS1Q14703 1052 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 DRAP1Q14919 205 aaPredicted RBP9.59□□□□□ -0.87
LMCD1-207ENST00000470776 GPNMBQ14956 572 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 SGSM1Q2NKQ1 1148 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 LMBRD2Q68DH5 695 aaPredicted RBP9.59□□□□□ -0.87
LMCD1-207ENST00000470776 JADE1Q6IE81 842 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 GJB7Q6PEY0 223 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 ARHGEF19Q8IW93 802 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 SHC3Q92529 594 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 TATDN2Q93075 761 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 ANKRD36BP1Q96IX9 119 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 KREMEN1Q96MU8 473 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 SPAG5Q96R06 1193 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 SYT11Q9BT88 431 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 TUBB2BQ9BVA1 445 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 XYLT2Q9H1B5 865 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 NXF3Q9H4D5 531 aaKnown RBP9.59□□□□□ -0.87
LMCD1-207ENST00000470776 APOBEC3GQ9HC16 384 aaKnown RBP9.59□□□□□ -0.87
LMCD1-207ENST00000470776 UBE2TQ9NPD8 197 aaPredicted RBP9.59□□□□□ -0.87
LMCD1-207ENST00000470776 FAM105AQ9NUU6 356 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 OGFRQ9NZT2 677 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 SIX4Q9UIU6 781 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 CNTN6Q9UQ52 1028 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 IPPQ9Y573 584 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 PCDHB2Q9Y5E7 798 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.59□□□□□ -0.87
LMCD1-207ENST00000470776 EPN1Q9Y6I3 576 aaPredicted RBP9.59□□□□□ -0.87
LMCD1-207ENST00000470776 KAT6AQ92794 2004 aa9.59□□□□□ -0.87
LMCD1-207ENST00000470776 A0A0U1RQF3 1178 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 SOWAHDA6NJG2 315 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 EIF3CLB5ME19 914 aaKnown RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 RBAK-RBAKDNI3L0D1 243 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 FOXN3O00409 490 aaPredicted RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 TLR3O15455 904 aaKnown RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 MGEA5O60502 916 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 RECQL4O94761 1208 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 GFPT2O94808 682 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 PARNO95453 639 aaKnown RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 TMEM191BP0C7N4 346 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 CCDC172P0C7W6 258 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 GHRP10912 638 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 SKIP12755 728 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 ZSCAN20P17040 1043 aaPredicted RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 CYP3A5P20815 502 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 CD52P31358 61 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 ATICP31939 592 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 PIK3CAP42336 1068 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 YARSP54577 528 aaKnown RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 MFAP3P55082 362 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 TFAMQ00059 246 aaKnown RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 PAK2Q13177 524 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 BIRC3Q13489 604 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 TMEM132DQ14C87 1099 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 ASIC2Q16515 512 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 WDR44Q5JSH3 913 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 SCARA3Q6AZY7 606 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 TWF2Q6IBS0 349 aaKnown RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 ZNF662Q6ZS27 426 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 LRRC8DQ7L1W4 858 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 FAM71AQ8IYT1 594 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 UBR7Q8N806 425 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 C1orf127Q8N9H9 656 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 FAM212AQ96EL1 285 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 FAM84AQ96KN4 292 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 ZMAT2Q96NC0 199 aaKnown RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 EIF3CQ99613 913 aaKnown RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 TRIM6Q9C030 488 aaPredicted RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 MTMR12Q9C0I1 747 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 RNF39Q9H2S5 420 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 FAM124BQ9H5Z6 455 aaPredicted RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 L2HGDHQ9H9P8 463 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 NHEJ1Q9H9Q4 299 aaPredicted RBP9.58□□□□□ -0.88
LMCD1-207ENST00000470776 GIT1Q9Y2X7 761 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 ADGRG1Q9Y653 693 aa9.58□□□□□ -0.88
LMCD1-207ENST00000470776 SMIM28A0A1B0GU29 152 aa9.57□□□□□ -0.88
LMCD1-207ENST00000470776 ANO9A1A5B4 782 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms