RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 ARHGEF19Q8IW93 802 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 HELQQ8TDG4 1101 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 FTHL17Q9BXU8 183 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 C11orf49Q9H6J7 331 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 ITGA11Q9UKX5 1188 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 PYCARDQ9ULZ3 195 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 A0A0U1RQF3 1178 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 SSU72P8A0A1W2PR75 194 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 F8VZ95 297 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 XPOTO43592 962 aaKnown RBP16.29■□□□□ 0.2
COL4A5-203ENST00000470339 STAU1O95793 577 aaKnown RBP16.29■□□□□ 0.2
COL4A5-203ENST00000470339 CST3P01034 146 aaPredicted RBP16.29■□□□□ 0.2
COL4A5-203ENST00000470339 ITGA4P13612 1032 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 TBXAS1P24557 533 aaPredicted RBP16.29■□□□□ 0.2
COL4A5-203ENST00000470339 ANXA13P27216 316 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 SOX5P35711 763 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 PRKCIP41743 596 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 TLE2Q04725 743 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 FAAP100Q0VG06 881 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 MAPK8IP2Q13387 824 aaPredicted RBP16.29■□□□□ 0.2
COL4A5-203ENST00000470339 RAPGEF1Q13905 1077 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 ASIC2Q16515 512 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 IRF2BP2Q7Z5L9 587 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 PPM1KQ8N3J5 372 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 C1orf127Q8N9H9 656 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 PGBD4Q96DM1 585 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 KIF12Q96FN5 646 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 CHP1Q99653 195 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 IFIH1Q9BYX4 1025 aaKnown RBP16.29■□□□□ 0.2
COL4A5-203ENST00000470339 OSBPL7Q9BZF2 842 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 VRTNQ9H8Y1 702 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 UBN1Q9NPG3 1134 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 RGS18Q9NS28 235 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 DPP3Q9NY33 737 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 AJAP1Q9UKB5 411 aaPredicted RBP16.29■□□□□ 0.2
COL4A5-203ENST00000470339 GIT1Q9Y2X7 761 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 HES2Q9Y543 173 aa16.29■□□□□ 0.2
COL4A5-203ENST00000470339 CCP110O43303 1012 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 LRRN2O75325 713 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 CYP3A5P20815 502 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 AKAP5P24588 427 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 ATN1P54259 1190 aaPredicted RBP16.28■□□□□ 0.2
COL4A5-203ENST00000470339 RBP5P82980 135 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 HGSNATQ68CP4 663 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 NECAB2Q7Z6G3 386 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 BEST2Q8NFU1 509 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 CXorf38Q8TB03 319 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 SHC3Q92529 594 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 APBB2Q92870 758 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 TATDN2Q93075 761 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 KREMEN1Q96MU8 473 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 ADAM2Q99965 735 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 GPR88Q9GZN0 384 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 PARP2Q9UGN5 583 aa16.28■□□□□ 0.2
COL4A5-203ENST00000470339 UBQLN1Q9UMX0 589 aaKnown RBP16.28■□□□□ 0.2
COL4A5-203ENST00000470339 SMIM28A0A1B0GU29 152 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 SOWAHDA6NJG2 315 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 FOXN3O00409 490 aaPredicted RBP16.27■□□□□ 0.2
COL4A5-203ENST00000470339 MGEA5O60502 916 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 EOMESO95936 686 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 CYLC1P35663 651 aaPredicted RBP16.27■□□□□ 0.2
COL4A5-203ENST00000470339 MYL6P60660 151 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 NOP14P78316 857 aaKnown RBP16.27■□□□□ 0.2
COL4A5-203ENST00000470339 FAM189BP81408 668 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 ARHGAP44Q17R89 818 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 TRIM60Q495X7 471 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 PLEKHG4Q58EX7 1191 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 E4F1Q66K89 784 aaPredicted RBP16.27■□□□□ 0.2
COL4A5-203ENST00000470339 RAD9BQ6WBX8 426 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 FAM71AQ8IYT1 594 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 DIS3LQ8TF46 1054 aaKnown RBP16.27■□□□□ 0.2
COL4A5-203ENST00000470339 PAWRQ96IZ0 340 aaKnown RBP16.27■□□□□ 0.2
COL4A5-203ENST00000470339 CCDC42Q96M95 316 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 ZMAT2Q96NC0 199 aaKnown RBP16.27■□□□□ 0.2
COL4A5-203ENST00000470339 PI4K2AQ9BTU6 479 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 APOL6Q9BWW8 343 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 XYLT2Q9H1B5 865 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 HIPK3Q9H422 1215 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 FAM124BQ9H5Z6 455 aaPredicted RBP16.27■□□□□ 0.2
COL4A5-203ENST00000470339 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.2
COL4A5-203ENST00000470339 ARHGAP20Q9P2F6 1191 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 SIX4Q9UIU6 781 aa16.27■□□□□ 0.2
COL4A5-203ENST00000470339 R3HCC1Q9Y3T6 440 aaKnown RBP16.27■□□□□ 0.2
COL4A5-203ENST00000470339 EPN1Q9Y6I3 576 aaPredicted RBP16.27■□□□□ 0.2
COL4A5-203ENST00000470339 TDRD15B5MCY1 1934 aaKnown RBP16.27■□□□□ 0.19
COL4A5-203ENST00000470339 BRCA2P51587 3418 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 ZNF500O60304 480 aaPredicted RBP16.26■□□□□ 0.19
COL4A5-203ENST00000470339 GFPT2O94808 682 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 CXCL10P02778 98 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 ITGB3P05106 788 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 KLHL30Q0D2K2 578 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 CUL2Q13617 745 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 SLC24A5Q71RS6 500 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 ECHDC2Q86YB7 292 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 LRRC52Q8N7C0 313 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 SEPT8Q92599 483 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 FAM84AQ96KN4 292 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 NIF3L1Q9GZT8 377 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms