RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 MXI1P50539 228 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 ZNF75DP51815 510 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 UBXN1Q04323 297 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 DSC1Q08554 894 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 C9orf50Q5SZB4 431 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 GLB1LQ6UWU2 654 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 ZNF280BQ86YH2 543 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 CACTINQ8WUQ7 758 aaKnown RBP12.16□□□□□ -0.46
SREBF1-209ENST00000470247 GDF15Q99988 308 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 CRACR2AQ9BSW2 395 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 TRIM5Q9C035 493 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 XYLT2Q9H1B5 865 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 TBC1D13Q9NVG8 400 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 DPP3Q9NY33 737 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 CACNG4Q9UBN1 327 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 LRFN2Q9ULH4 789 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 UBQLN1Q9UMX0 589 aaKnown RBP12.16□□□□□ -0.46
SREBF1-209ENST00000470247 INPP5FQ9Y2H2 1132 aa12.16□□□□□ -0.46
SREBF1-209ENST00000470247 RALGAPA2Q2PPJ7 1873 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 A0A1W2PQC6 194 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 H0YGN5 161 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 TULP1O00294 542 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-209ENST00000470247 PIRO00625 290 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 PPEF2O14830 753 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 STX10O60499 249 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 N4BP1O75113 896 aaKnown RBP12.15□□□□□ -0.46
SREBF1-209ENST00000470247 NOL4O94818 638 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 ADCY5O95622 1261 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 SLC9A1P19634 815 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 LRPAP1P30533 357 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 MYL7Q01449 175 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 APBA1Q02410 837 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 GRIK3Q13003 919 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 FILIP1LQ4L180 1135 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 C9orf57Q5W0N0 161 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 CD300LGQ6UXG3 332 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 EHBP1Q8NDI1 1231 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 ELMO3Q96BJ8 720 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 MRFAP1L1Q96HT8 127 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 ANKRD36BP1Q96IX9 119 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 RPS6KC1Q96S38 1066 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 GOLGA2P5Q9HBQ8 144 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 APOBEC3GQ9HC16 384 aaKnown RBP12.15□□□□□ -0.46
SREBF1-209ENST00000470247 SIX2Q9NPC8 291 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 RAB20Q9NX57 234 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 HCSTQ9UBK5 93 aa12.15□□□□□ -0.46
SREBF1-209ENST00000470247 PTPRSQ13332 1948 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 TBKBP1A7MCY6 615 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 PES1O00541 588 aaKnown RBP12.14□□□□□ -0.47
SREBF1-209ENST00000470247 EPHB6O15197 1021 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 HOXA2O43364 376 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 CBFA2T2O43439 604 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 GJB5O95377 273 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 TNNC2P02585 160 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 ITGB3P05106 788 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 TPM2P07951 284 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 TMEM191BP0C7N4 346 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 POLR2BP30876 1174 aaKnown RBP12.14□□□□□ -0.47
SREBF1-209ENST00000470247 MYL6P60660 151 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 HTRA4P83105 476 aaPredicted RBP12.14□□□□□ -0.47
SREBF1-209ENST00000470247 NCOA4Q13772 614 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 SYCP1Q15431 976 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 SHHQ15465 462 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 EXOC3L4Q17RC7 722 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 FKBP15Q5T1M5 1219 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 FAM117BQ6P1L5 589 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 GBP6Q6ZN66 633 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 VSTM4Q8IW00 320 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 COLGALT2Q8IYK4 626 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 FBXL13Q8NEE6 735 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 BEST2Q8NFU1 509 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 PHOSPHO2Q8TCD6 241 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 TATDN2Q93075 761 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 PAAF1Q9BRP4 392 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 PI4K2AQ9BTU6 479 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 NRDE2Q9H7Z3 1164 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 SLC38A7Q9NVC3 462 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
SREBF1-209ENST00000470247 KANSL3Q9P2N6 904 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 ITGA11Q9UKX5 1188 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 AGAP1Q9UPQ3 857 aa12.14□□□□□ -0.47
SREBF1-209ENST00000470247 PDCD11Q14690 1871 aaKnown RBP12.14□□□□□ -0.47
SREBF1-209ENST00000470247 ZBBXA8MT70 800 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 ASS1P00966 412 aaKnown RBP12.13□□□□□ -0.47
SREBF1-209ENST00000470247 LINC00271P0C7V0 271 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 KCNJ6P48051 423 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 RBP5P82980 135 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 TUSC3Q13454 348 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 BIRC3Q13489 604 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 UPP1Q16831 310 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 SPOPLQ6IQ16 392 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 PHLDB3Q6NSJ2 640 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 TRIM65Q6PJ69 517 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 C3orf58Q8NDZ4 430 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 INTS2Q9H0H0 1204 aaKnown RBP12.13□□□□□ -0.47
SREBF1-209ENST00000470247 CWH43Q9H720 699 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 VRTNQ9H8Y1 702 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 DNAJB4Q9UDY4 337 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 NUB1Q9Y5A7 615 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms