RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 GPR88Q9GZN0 384 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 TMEM117Q9H0C3 514 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 RASSF4Q9H2L5 321 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 CENPHQ9H3R5 247 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 ZNF395Q9H8N7 513 aaPredicted RBP8.57□□□□□ -1.04
SMC4-212ENST00000470240 OSGEPQ9NPF4 335 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.57□□□□□ -1.04
SMC4-212ENST00000470240 SLC9A2Q9UBY0 812 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 PGAP2Q9UHJ9 254 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 LCMT1Q9UIC8 334 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 RRP15Q9Y3B9 282 aaKnown RBP8.57□□□□□ -1.04
SMC4-212ENST00000470240 ARID2Q68CP9 1835 aa8.57□□□□□ -1.04
SMC4-212ENST00000470240 PASKQ96RG2 1323 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 FER1L6Q2WGJ9 1857 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 GOLGA8IPA6NC78 632 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 GOLGA8JA6NMD2 632 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 NDUFAB1O14561 156 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 DDX3YO15523 660 aaKnown RBP8.56□□□□□ -1.04
SMC4-212ENST00000470240 ZEB2O60315 1214 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 FAM153BP0C7A2 387 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 KRT5P13647 590 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 CTNNA2P26232 953 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 CNGA1P29973 690 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 VEGFBP49765 207 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 IRAK1P51617 712 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 RWDD2BP57060 319 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 CDR2Q01850 454 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 PRKCEQ02156 737 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 CYP24A1Q07973 514 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 PPP3CAQ08209 521 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 VAC14Q08AM6 782 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 MESDQ14696 234 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 UGCGQ16739 394 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 PTPROQ16827 1216 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.56□□□□□ -1.042e-41■■■■■ 207.1
SMC4-212ENST00000470240 SUPT20HL1Q3ZLR7 823 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 FAM153CQ494X1 144 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 XKR3Q5GH77 459 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 LIN9Q5TKA1 542 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 PLA2G4FQ68DD2 849 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 TRIM72Q6ZMU5 477 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 CEP128Q6ZU80 1094 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 ZNF677Q86XU0 584 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 ARHGEF19Q8IW93 802 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 NPAS3Q8IXF0 933 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 FAM71AQ8IYT1 594 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 CHST13Q8NET6 341 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 LMO3Q8TAP4 145 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 DEPTORQ8TB45 409 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 ZNF564Q8TBZ8 553 aaPredicted RBP8.56□□□□□ -1.04
SMC4-212ENST00000470240 BCAS4Q8TDM0 211 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 GRK7Q8WTQ7 553 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 SHC3Q92529 594 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 SAAL1Q96ER3 474 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 MFSD14AQ96MC6 490 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 TEPSINQ96N21 525 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 WRNIP1Q96S55 665 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 NTPCRQ9BSD7 190 aaKnown RBP8.56□□□□□ -1.04
SMC4-212ENST00000470240 NUP85Q9BW27 656 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 IMPG2Q9BZV3 1241 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 POLR3FQ9H1D9 316 aaPredicted RBP8.56□□□□□ -1.04
SMC4-212ENST00000470240 GOLPH3Q9H4A6 298 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 CNOT10Q9H9A5 744 aaKnown RBP8.56□□□□□ -1.04
SMC4-212ENST00000470240 RAB20Q9NX57 234 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 HOXC10Q9NYD6 342 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 FBXO40Q9UH90 709 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 AMACRQ9UHK6 382 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 FAM153AQ9UHL3 310 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 FEZ2Q9UHY8 353 aaPredicted RBP8.56□□□□□ -1.04
SMC4-212ENST00000470240 HACL1Q9UJ83 578 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 DNMT3LQ9UJW3 386 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 GTF3C4Q9UKN8 822 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 COQ4Q9Y3A0 265 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 PCDHB11Q9Y5F2 797 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 ALG6Q9Y672 507 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 GJA3Q9Y6H8 435 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 COL4A5P29400 1685 aa8.56□□□□□ -1.04
SMC4-212ENST00000470240 LTBP3Q9NS15 1303 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 PARP14Q460N5 1801 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 FIGNL2A6NMB9 653 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 ATP2A1O14983 1001 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 TTI1O43156 1089 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 DAPK3O43293 454 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 EXTL3O43909 919 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 CCNE2O96020 404 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 KRT14P02533 472 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 CYP1A2P05177 515 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 ADRB2P07550 413 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 SUPT20HL2P0C7V6 817 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 DLATP10515 647 aaKnown RBP8.55□□□□□ -1.04
SMC4-212ENST00000470240 CYP11B1P15538 503 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 PTPRAP18433 802 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 TBXAS1P24557 533 aaPredicted RBP8.55□□□□□ -1.04
SMC4-212ENST00000470240 ATP5DP30049 168 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 MAPK4P31152 587 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 HSD17B3P37058 310 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 PIK3CAP42336 1068 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 SLC1A1P43005 524 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 NSFP46459 744 aaKnown RBP8.55□□□□□ -1.04
SMC4-212ENST00000470240 FNTAP49354 379 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms