RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 SLC12A8A0AV02 714 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CDC14CA4D256 554 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 GOLGA8JA6NMD2 632 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 SNTNA6NMZ2 147 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 NOTOA8MTQ0 251 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 TARM1B6A8C7 271 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 GOLGA8KD6RF30 607 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 GOLGA8SH3BPF8 625 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 GOLGA8TH3BQL2 631 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 L7N2F9 121 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 GIPC1O14908 333 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 SERPINB7O75635 380 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 TRIM16O95361 564 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 PSAPP07602 524 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 FGRP09769 529 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 GOLGA8HP0CJ92 632 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CHRNB1P11230 501 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 EDN3P14138 238 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CSF2RAP15509 400 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 ARF4P18085 180 aaPredicted RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 MX2P20592 715 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 FGFR3P22607 806 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 RFC4P35249 363 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 ECE1P42892 770 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 NEK3P51956 506 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CCNG1P51959 295 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 GTF2A2P52657 109 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 ARFIP1P53367 373 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 GSDMDP57764 484 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 PURAQ00577 322 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CDK18Q07002 472 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 PPFIA1Q13136 1202 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 DNAJC3Q13217 504 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 DHX34Q14147 1143 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 STILQ15468 1287 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CNGA2Q16280 664 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 KLHL38Q2WGJ6 581 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 TKFCQ3LXA3 575 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 TCTE1Q5JU00 501 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 SHEQ5VZ18 495 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CYB5D1Q6P9G0 228 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 BNC2Q6ZN30 1099 aaPredicted RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 AGMOQ6ZNB7 445 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 BEND4Q6ZU67 534 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF365Q70YC5 407 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 TBC1D1Q86TI0 1168 aaPredicted RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 STK32CQ86UX6 486 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 FAM228AQ86W67 206 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 ERO1BQ86YB8 467 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CCNJLQ8IV13 435 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 P3H2Q8IVL5 708 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 PALM2Q8IXS6 379 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CBARPQ8N350 705 aaPredicted RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 STKLD1Q8NE28 680 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 GLIS3Q8NEA6 775 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 PJA1Q8NG27 643 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 LILRB4Q8NHJ6 448 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 ANGPTL6Q8NI99 470 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CAGE1Q8TC20 777 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 IFI44Q8TCB0 444 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 DENND1AQ8TEH3 1009 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 LEO1Q8WVC0 666 aaPredicted RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 EFHD2Q96C19 240 aaPredicted RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 ANKRD36BP1Q96IX9 119 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 METTL2AQ96IZ6 378 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 PPM1MQ96MI6 270 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 NSUN5Q96P11 429 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 STRBPQ96SI9 672 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CDRT15Q96T59 188 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 EIF2AK1Q9BQI3 630 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 NAA15Q9BXJ9 866 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 IFIH1Q9BYX4 1025 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 CEP44Q9C0F1 390 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 FAM192AQ9GZU8 254 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 EHD4Q9H223 541 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 ACTR5Q9H9F9 607 aaPredicted RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 WDR6Q9NNW5 1121 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 ARMC1Q9NVT9 282 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 RMND1Q9NWS8 449 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 PAQR5Q9NXK6 330 aaPredicted RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 TLR7Q9NYK1 1049 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 GGA3Q9NZ52 723 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 GMIPQ9P107 970 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 NFKBIL1Q9UBC1 381 aaPredicted RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 EXTL2Q9UBQ6 330 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 FETUBQ9UGM5 382 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 SEC63Q9UGP8 760 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 DPP7Q9UHL4 492 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 SAP30BPQ9UHR5 308 aaKnown RBP5.46□□□□□ -1.54
COL3A1-205ENST00000470167 SALL4Q9UJQ4 1053 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 BAG5Q9UL15 447 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 PYCARDQ9ULZ3 195 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 MAPRE3Q9UPY8 281 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 TTC21BQ7Z4L5 1316 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 TTC21AQ8NDW8 1320 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 NCOA2Q15596 1464 aa5.45□□□□□ -1.54
COL3A1-205ENST00000470167 COL17A1Q9UMD9 1497 aaPredicted RBP5.45□□□□□ -1.54
COL3A1-205ENST00000470167 A0A088AWK7 358 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms