RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 ZFYVE19Q96K21 471 aa9.16□□□□□ -0.94
LSM2-210ENST00000470086 IER2Q9BTL4 223 aa9.16□□□□□ -0.94
LSM2-210ENST00000470086 DUSP15Q9H1R2 295 aaPredicted RBP9.16□□□□□ -0.94
LSM2-210ENST00000470086 CHMP4BQ9H444 224 aaKnown RBP9.16□□□□□ -0.94
LSM2-210ENST00000470086 DISC1Q9NRI5 854 aa9.16□□□□□ -0.94
LSM2-210ENST00000470086 STK39Q9UEW8 545 aa9.16□□□□□ -0.94
LSM2-210ENST00000470086 DPP7Q9UHL4 492 aa9.16□□□□□ -0.94
LSM2-210ENST00000470086 SSX2IPQ9Y2D8 614 aa9.16□□□□□ -0.94
LSM2-210ENST00000470086 MRPS17Q9Y2R5 130 aaKnown RBP9.16□□□□□ -0.94
LSM2-210ENST00000470086 SAMM50Q9Y512 469 aa9.16□□□□□ -0.94
LSM2-210ENST00000470086 COL12A1Q99715 3063 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 HECTD1Q9ULT8 2610 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 ERICH2A1L162 156 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 CARNS1A5YM72 827 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 WDR64B1ANS9 1081 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 PRC1O43663 620 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 MAFO75444 373 aaPredicted RBP9.15□□□□□ -0.94
LSM2-210ENST00000470086 C1RP00736 705 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 EDN1P05305 212 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 CYP3A4P08684 503 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 CALM1P0DP23 149 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 CALM2P0DP24 149 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 CALM3P0DP25 149 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 SKIP12755 728 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 CNR2P34972 360 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 OR1D2P34982 312 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 ZNF76P36508 570 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 HSP90AA2PQ14568 343 aaPredicted RBP9.15□□□□□ -0.94
LSM2-210ENST00000470086 PON2Q15165 354 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 PLK5Q496M5 336 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 PRR16Q569H4 304 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 FAM171A1Q5VUB5 890 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 ELMSAN1Q6PJG2 1045 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 B3GNT9Q6UX72 402 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 METTL3Q86U44 580 aaKnown RBP9.15□□□□□ -0.94
LSM2-210ENST00000470086 CEP57Q86XR8 500 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 NCOA7Q8NI08 942 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 TMEM143Q96AN5 459 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 HHIPQ96QV1 700 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 FSCN3Q9NQT6 498 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 KCNH3Q9ULD8 1083 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 NEUROG3Q9Y4Z2 214 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 COL4A3BPQ9Y5P4 624 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 CDY1Q9Y6F8 540 aa9.15□□□□□ -0.94
LSM2-210ENST00000470086 ACACAQ13085 2346 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 SF3B1O75533 1304 aaKnown RBP eCLIP9.14□□□□□ -0.95
LSM2-210ENST00000470086 TCHHQ07283 1943 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 RCCD1A6NED2 376 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 SMCO2A6NFE2 343 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 MAN2B1O00754 1011 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 XYLBO75191 536 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 SEC24AO95486 1093 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 PRKCBP05771 671 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 TKTP29401 623 aaKnown RBP9.14□□□□□ -0.95
LSM2-210ENST00000470086 CTHP32929 405 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 TNK2Q07912 1038 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 AP3B2Q13367 1082 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 PPP1R18Q6NYC8 613 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 RALYLQ86SE5 291 aaKnown RBP9.14□□□□□ -0.95
LSM2-210ENST00000470086 TICAM2Q86XR7 235 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 CORO1BQ9BR76 489 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 TTPALQ9BTX7 342 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 MKNK1Q9BUB5 465 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 TRMT61BQ9BVS5 477 aaKnown RBP9.14□□□□□ -0.95
LSM2-210ENST00000470086 NIFKQ9BYG3 293 aaKnown RBP9.14□□□□□ -0.95
LSM2-210ENST00000470086 TBC1D22BQ9NU19 505 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 GTSE1Q9NYZ3 720 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 KANSL3Q9P2N6 904 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 MTRRQ9UBK8 725 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 MSRB2Q9Y3D2 182 aa9.14□□□□□ -0.95
LSM2-210ENST00000470086 ZNF462Q96JM2 2506 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 MGAQ8IWI9 3026 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 HEPACAM2A8MVW5 462 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 SPECC1L-ADORA2AF8WAN1 911 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 ZBTB39O15060 712 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 FOXD2O60548 495 aaPredicted RBP9.13□□□□□ -0.95
LSM2-210ENST00000470086 SRGAP2CP0DJJ0 459 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 PSMC3P17980 439 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 BCKDHBP21953 392 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 CDC27P30260 824 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 SETQ01105 290 aaPredicted RBP9.13□□□□□ -0.95
LSM2-210ENST00000470086 ROR1Q01973 937 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 GRIK3Q13003 919 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 TRDNQ13061 729 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 RAB33AQ14088 237 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 PPP2R5DQ14738 602 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 B4GALNT3Q6L9W6 998 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 CACNA2D4Q7Z3S7 1137 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 LURAP1LQ8IV03 231 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 GPR65Q8IYL9 337 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 EXOC6Q8TAG9 804 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 MDM1Q8TC05 714 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 PRPF31Q8WWY3 499 aaKnown RBP9.13□□□□□ -0.95
LSM2-210ENST00000470086 EZH1Q92800 747 aaPredicted RBP9.13□□□□□ -0.95
LSM2-210ENST00000470086 SLC5A5Q92911 643 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 LOXL4Q96JB6 756 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 TCEANC2Q96MN5 208 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 GOLGA2P5Q9HBQ8 144 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 AVENQ9NQS1 362 aaPredicted RBP9.13□□□□□ -0.95
LSM2-210ENST00000470086 XPNPEP1Q9NQW7 623 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms