RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 RINT1Q6NUQ1 792 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 ANKS3Q6ZW76 656 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 HS6ST3Q8IZP7 471 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 IGSF22Q8N9C0 903 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 ZSWIM3Q96MP5 696 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 PLIN2Q99541 437 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 HINFPQ9BQA5 517 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 TCHPQ9BT92 498 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
HDAC3-204ENST00000469207 CYP4F11Q9HBI6 524 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 LTB4R2Q9NPC1 389 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 HEBP1Q9NRV9 189 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 PPP4R2Q9NY27 417 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 DMXL1Q9Y485 3027 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 TRAPPC3O43617 180 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 GJA1P17302 382 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 TARSP26639 723 aaKnown RBP13.44□□□□□ -0.26
HDAC3-204ENST00000469207 YARSP54577 528 aaKnown RBP13.44□□□□□ -0.26
HDAC3-204ENST00000469207 FOXK2Q01167 660 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 PRKCQQ04759 706 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 MRPL58Q14197 206 aaKnown RBP13.44□□□□□ -0.26
HDAC3-204ENST00000469207 GRM2Q14416 872 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 PRSS36Q5K4E3 855 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 TPRG1Q6ZUI0 275 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 C1orf186Q6ZWK4 172 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 GPIHBP1Q8IV16 184 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 SUMF1Q8NBK3 374 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 UROC1Q96N76 676 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 ACAP3Q96P50 834 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 KIF2CQ99661 725 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 LLPHQ9BRT6 129 aaKnown RBP13.44□□□□□ -0.26
HDAC3-204ENST00000469207 CCDC94Q9BW85 323 aaPredicted RBP13.44□□□□□ -0.26
HDAC3-204ENST00000469207 MRPL4Q9BYD3 311 aaKnown RBP13.44□□□□□ -0.26
HDAC3-204ENST00000469207 BCO2Q9BYV7 579 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 SEMA4AQ9H3S1 761 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 TMEM134Q9H6X4 195 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 KMT5AQ9NQR1 393 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 ARHGAP28Q9P2N2 729 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 FBXL5Q9UKA1 691 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 KCNH3Q9ULD8 1083 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 DNM3Q9UQ16 869 aa13.44□□□□□ -0.26
HDAC3-204ENST00000469207 ZNF292O60281 2723 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 NPHP3-ACAD11A0A0J9YXS1 232 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 MED19A0JLT2 244 aaPredicted RBP13.43□□□□□ -0.26
HDAC3-204ENST00000469207 ARHGEF37A1IGU5 675 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 PRRG1O14668 218 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 LAMTOR5O43504 91 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 LRG1P02750 347 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 NEFLP07196 543 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 POU2F2P09086 479 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 ATF2P15336 505 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 PROZP22891 400 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 FCARP24071 287 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 ELF1P32519 619 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 ORC2Q13416 577 aaPredicted RBP13.43□□□□□ -0.26
HDAC3-204ENST00000469207 SLC10A6Q3KNW5 377 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 FAM78AQ5JUQ0 283 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 SLC8B1Q6J4K2 584 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 ERMP1Q7Z2K6 904 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 FAM184AQ8NB25 1140 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 HAPLN2Q9GZV7 340 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 TOPORSQ9NS56 1045 aaPredicted RBP13.43□□□□□ -0.26
HDAC3-204ENST00000469207 TUBGCP4Q9UGJ1 667 aa13.43□□□□□ -0.26
HDAC3-204ENST00000469207 NOL7Q9UMY1 257 aaKnown RBP13.43□□□□□ -0.26
HDAC3-204ENST00000469207 TIMM13Q9Y5L4 95 aaPredicted RBP13.43□□□□□ -0.26
HDAC3-204ENST00000469207 PHLPP2Q6ZVD8 1323 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 MOSPD3O75425 235 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 ECI2O75521 394 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 MCF2P10911 925 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 KCNE1P15382 129 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 U2AF2P26368 475 aaKnown RBP eCLIP13.42□□□□□ -0.26
HDAC3-204ENST00000469207 VIPR2P41587 438 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 TRAPPC10P48553 1259 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 CDR1P51861 262 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 PFKPQ01813 784 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
HDAC3-204ENST00000469207 ADCY1Q08828 1119 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 DMP1Q13316 513 aaPredicted RBP13.42□□□□□ -0.26
HDAC3-204ENST00000469207 CTXN3Q4LDR2 81 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 ZBTB41Q5SVQ8 909 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 KRT79Q5XKE5 535 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 RNF19BQ6ZMZ0 732 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 RUBCNQ92622 972 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 TBC1D32Q96NH3 1257 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 PNMA5Q96PV4 448 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 GDE1Q9NZC3 331 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 CEP72Q9P209 647 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 CNTN3Q9P232 1028 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 NDRG2Q9UN36 371 aaKnown RBP13.42□□□□□ -0.26
HDAC3-204ENST00000469207 NUB1Q9Y5A7 615 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 INSL5Q9Y5Q6 135 aa13.42□□□□□ -0.26
HDAC3-204ENST00000469207 MIA3Q5JRA6 1907 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 FANCMQ8IYD8 2048 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 KINO60870 393 aaKnown RBP13.41□□□□□ -0.26
HDAC3-204ENST00000469207 OR4Q2P0C623 313 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 MYL4P12829 197 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 MCM4P33991 863 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 GUCY2FP51841 1108 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 HMGN5P82970 282 aaKnown RBP13.41□□□□□ -0.26
HDAC3-204ENST00000469207 ZC3H14Q6PJT7 736 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms