RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 XYLBO75191 536 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 ABLIM3O94929 683 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 MCL1Q07820 350 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 STRN3Q13033 797 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 SEZ6Q53EL9 994 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 VARS2Q5ST30 1063 aaKnown RBP16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 SLC8B1Q6J4K2 584 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 ST13P5Q8NFI4 369 aaPredicted RBP16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 ZNF461Q8TAF7 563 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 ITFG1Q8TB96 612 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 FGF13Q92913 245 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 FGF14Q92915 247 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 TBC1D32Q96NH3 1257 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 SLC2A4RGQ9NR83 387 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 NUMBLQ9Y6R0 609 aa16.18■□□□□ 0.18
SDCCAG3-209ENST00000468963 MYH11P35749 1972 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 SYN3O14994 580 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 HARSP12081 509 aaKnown RBP16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 NBL1P41271 181 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 NCKAP1LP55160 1127 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 PARM1Q6UWI2 310 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 CCDC105Q8IYK2 499 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 GPR152Q8TDT2 470 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 CDK5RAP3Q96JB5 506 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 BLOC1S4Q9NUP1 217 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 HCFC1R1Q9NWW0 138 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 LARSQ9P2J5 1176 aaKnown RBP16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 KCNH3Q9ULD8 1083 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 POLIQ9UNA4 740 aa16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.17■□□□□ 0.18
SDCCAG3-209ENST00000468963 ARHGEF37A1IGU5 675 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 WDR27A2RRH5 827 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 CLDN3O15551 220 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 UBA7P41226 1012 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 GPC5P78333 572 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 ROR1Q01973 937 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 GRIN1Q05586 938 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 NOLC1Q14978 699 aaKnown RBP eCLIP16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 ZBTB6Q15916 424 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 PHLDB3Q6NSJ2 640 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 POTEHQ6S545 545 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 HAUS6Q7Z4H7 955 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 DTWD2Q8NBA8 298 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 SUSD3Q96L08 255 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 PLEKHA5Q9HAU0 1116 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 UPF2Q9HAU5 1272 aaKnown RBP16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 CA14Q9ULX7 337 aa16.16■□□□□ 0.18
SDCCAG3-209ENST00000468963 TTC26A0AVF1 554 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 H0YCG3 227 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 GFRA3O60609 400 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 CLTAP09496 248 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 ATF2P15336 505 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 ZNF131P52739 623 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 PABPC1LQ4VXU2 614 aaKnown RBP16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 TCEAL8Q8IYN2 117 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 TMEM130Q8N3G9 435 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 REEP2Q9BRK0 252 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 AVENQ9NQS1 362 aaPredicted RBP16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 ANKFY1Q9P2R3 1169 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 FBXL5Q9UKA1 691 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 ODF2LQ9ULJ1 636 aa16.15■□□□□ 0.18
SDCCAG3-209ENST00000468963 SPTBN4Q9H254 2564 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 H7C4K7 107 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 STK25O00506 426 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 SEC24AO95486 1093 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 BMP15O95972 392 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 PIGRP01833 764 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 ADRB2P07550 413 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 CXCL8P10145 99 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 LRPAP1P30533 357 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 LONP1P36776 959 aaKnown RBP16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 CUL4AQ13619 759 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 MCM6Q14566 821 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 SF3A1Q15459 793 aaKnown RBP16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 MTSS1LQ765P7 747 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 BRAPQ7Z569 592 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 GPBP1Q86WP2 473 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 NPAS3Q8IXF0 933 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 DDX12PQ92771 950 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 CALML4Q96GE6 196 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 FIZ1Q96SL8 496 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 TBC1D17Q9HA65 648 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 TUBGCP4Q9UGJ1 667 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 TBX20Q9UMR3 447 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 NUB1Q9Y5A7 615 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 CACNA1IQ9P0X4 2223 aa16.14■□□□□ 0.17
SDCCAG3-209ENST00000468963 LACTBL1A8MY62 500 aa16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 FAM189A1O60320 539 aa16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 RHOP08100 348 aa16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 PTPN2P17706 415 aa16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 SCP2P22307 547 aa16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 ELF1P32519 619 aa16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 TNFSF9P41273 254 aa16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 STARD6P59095 220 aa16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 SPAG1Q07617 926 aa16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 DHX8Q14562 1220 aaKnown RBP16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 KARSQ15046 597 aaKnown RBP16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 ANGPT1Q15389 498 aa16.13■□□□□ 0.17
SDCCAG3-209ENST00000468963 SLC5A9Q2M3M2 681 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms