RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TCF7P36402 384 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 RCAN1P53805 252 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 YARSP54577 528 aaKnown RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 GEMIN4P57678 1058 aaKnown RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 EVA1CP58658 441 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 MAGOHP61326 146 aaKnown RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 HERVK_113P62684 666 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 GOLGA8FQ08AF8 430 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 GOLGA8DPQ0D2H9 430 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 NFIAQ12857 509 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 PAK1Q13153 545 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 RCN2Q14257 317 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 PLS1Q14651 629 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 PPP2R5BQ15173 497 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 RCN1Q15293 331 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 ZCWPW2Q504Y3 356 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 PARP10Q53GL7 1025 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 SLC9C2Q5TAH2 1124 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 ARMC3Q5W041 872 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 TSHZ3Q63HK5 1081 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 MFSD5Q6N075 450 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 NEPROQ6NW34 567 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 FOXR2Q6PJQ5 311 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 PPP1R21Q6ZMI0 780 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 ARHGEF18Q6ZSZ5 1173 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 EXOC3L1Q86VI1 746 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 NUP93Q8N1F7 819 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 TTC39CQ8N584 583 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 MB21D1Q8N884 522 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 SPATA5Q8NB90 893 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 ACTRT1Q8TDG2 376 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 CPLX3Q8WVH0 158 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 SCFD1Q8WVM8 642 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 SYN2Q92777 582 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 CASP10Q92851 521 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 STMN2Q93045 179 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 MAGOHBQ96A72 148 aaKnown RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 SGF29Q96ES7 293 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 PHACTR3Q96KR7 559 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 C8orf48Q96LL4 319 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 LRGUKQ96M69 825 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 ZNF184Q99676 751 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 RUSC1Q9BVN2 902 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 IFIH1Q9BYX4 1025 aaKnown RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 UNKQ9C0B0 810 aaKnown RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 ASCC2Q9H1I8 757 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 CCDC68Q9H2F9 335 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 TMEM60Q9H2L4 133 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 DPH5Q9H2P9 285 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 CHRDQ9H2X0 955 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 FOXP1Q9H334 677 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 Q9H521 79 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 SYNCQ9H7C4 482 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 NHEJ1Q9H9Q4 299 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 IL1RAPL2Q9NP60 686 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 PALMDQ9NP74 551 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 DZANK1Q9NVP4 752 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 GIN1Q9NXP7 522 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 STX18Q9P2W9 335 aaKnown RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 SEC63Q9UGP8 760 aaKnown RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 ZNHIT2Q9UHR6 403 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 SALL4Q9UJQ4 1053 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 FOXD3Q9UJU5 478 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 UTP11Q9Y3A2 253 aaKnown RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 SRPRBQ9Y5M8 271 aaKnown RBP5.18□□□□□ -1.58
SF3B1-207ENST00000468925 ACTL7BQ9Y614 415 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 CAPN6Q9Y6Q1 641 aa5.18□□□□□ -1.58
SF3B1-207ENST00000468925 MYH8P13535 1937 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 DIP2AQ14689 1571 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 NRKQ7Z2Y5 1582 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 A0A0J9YVX5 310 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 KCNJ18B7U540 433 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 ENC1O14682 589 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 AREL1O15033 823 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 TEX33O43247 280 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 GAS2O43903 313 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 ATP9AO75110 1047 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 CLASP2O75122 1294 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 ATP2C2O75185 946 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PEX11AO75192 247 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 FAM13AO94988 1023 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 IGHA2P01877 340 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PDHA1P08559 390 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 SRGNP10124 158 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 VAV1P15498 845 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 XBP1P17861 261 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 ATF4P18848 351 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 KRT4P19013 534 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PTPN4P29074 926 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 HOXA10P31260 410 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PHBP35232 272 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 MAGEA10P43363 369 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 CARSP49589 748 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 SLC18A1P54219 525 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 BPIFB4P59827 614 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 KCNJ2P63252 427 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 GSTM4Q03013 218 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 UBXN1Q04323 297 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PDE4BQ07343 736 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 KCNJ12Q14500 433 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms