RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 SLC24A3Q9HC58 644 aa16.83■□□□□ 0.29
TSPAN4-211ENST00000468468 ANKEF1Q9NU02 776 aa16.83■□□□□ 0.29
TSPAN4-211ENST00000468468 DNAJC17Q9NVM6 304 aaKnown RBP16.83■□□□□ 0.29
TSPAN4-211ENST00000468468 TPX2Q9ULW0 747 aaKnown RBP16.83■□□□□ 0.29
TSPAN4-211ENST00000468468 CCNE2O96020 404 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 CYP24A1Q07973 514 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 SLC39A4Q6P5W5 647 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 TRPM8Q7Z2W7 1104 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 FAM228AQ86W67 206 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 WDR64B1ANS9 1081 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 CREB1P16220 341 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 JAK3P52333 1124 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 ITGA8P53708 1063 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 SOX10P56693 466 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 RPS6P62753 249 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 PGM5Q15124 567 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 MCOLN2Q8IZK6 566 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 MAIP1Q8WWC4 291 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 BSNDQ8WZ55 320 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 ATG4CQ96DT6 458 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 SCLT1Q96NL6 688 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 WRNIP1Q96S55 665 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 HERPUD2Q9BSE4 406 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 SLC12A4Q9UP95 1085 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 CD2APQ9Y5K6 639 aa16.83■□□□□ 0.28
TSPAN4-211ENST00000468468 MROH7Q68CQ1 1323 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 TMEM120BA0PK00 339 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 IVDP26440 423 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 GTF2H1P32780 548 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 PTK6Q13882 451 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 USP37Q86T82 979 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 TRPM4Q8TD43 1214 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 CPA5Q8WXQ8 436 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 FAM84AQ96KN4 292 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 TTC4O95801 387 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 GSTA1P08263 222 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 UNGP13051 313 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 RRM1P23921 792 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 KYNUQ16719 465 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 FAM133BQ5BKY9 247 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 HIBCHQ6NVY1 386 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 SYDE1Q6ZW31 735 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 ANO5Q75V66 913 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 GIMAP7Q8NHV1 300 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 GRK7Q8WTQ7 553 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 FBXL18Q96ME1 805 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 DCLK3Q9C098 648 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 KCNK9Q9NPC2 374 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 CTNNAL1Q9UBT7 734 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 RIPK3Q9Y572 518 aa16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 CTDP1Q9Y5B0 961 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-211ENST00000468468 LTBP3Q9NS15 1303 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 TESPA1A2RU30 521 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 FOXO6A8MYZ6 492 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 SNX3O60493 162 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 GAS8O95995 478 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 ATP5DP30049 168 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 SFNP31947 248 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 ELF3P78545 371 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 C2CD6Q53TS8 623 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 CEP57Q86XR8 500 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 ANKRD42Q8N9B4 389 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 ANAPC5Q9UJX4 755 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 ZNFX1Q9P2E3 1918 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 TCP11X1B4DZS4 312 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 MGRN1O60291 552 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 ATF2P15336 505 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 MAN1A1P33908 653 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 ADCY8P40145 1251 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 VPS41P49754 854 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 KRT76Q01546 638 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 GHRHRQ02643 423 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 GCNT1Q02742 428 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 LLGL2Q6P1M3 1020 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 VSTM1Q6UX27 236 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 SCYL3Q8IZE3 742 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 GPD1LQ8N335 351 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 CCDC63Q8NA47 563 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 HEMGNQ9BXL5 484 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 ABCF3Q9NUQ8 709 aa16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 R3HDM2Q9Y2K5 976 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-211ENST00000468468 THAP12O43422 761 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 PAX7P23759 505 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 SLC1A1P43005 524 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 BACE1P56817 501 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 PREPLQ4J6C6 727 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 DAB2IPQ5VWQ8 1189 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 ENOSF1Q7L5Y1 443 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 ATL2Q8NHH9 583 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 FAM81BQ96LP2 452 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 PWWP2AQ96N64 755 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 RMDN3Q96TC7 470 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 FAM213AQ9BRX8 229 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 MLXIPLQ9NP71 852 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 AVENQ9NQS1 362 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 C1orf112Q9NSG2 853 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 FGFR1OP2Q9NVK5 253 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 VWA5AO00534 786 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 HNRNPDLO14979 420 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms