RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 EP400NLQ6ZTU2 488 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 TAS1R1Q7RTX1 841 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 ZNF720Q7Z2F6 126 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 MAP4K3Q8IVH8 894 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 SLC22A17Q8WUG5 538 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 AUTS2Q8WXX7 1259 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 SUSD6Q92537 303 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 ZMAT2Q96NC0 199 aaKnown RBP12.19□□□□□ -0.46
COL4A6-205ENST00000468338 ACAP3Q96P50 834 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 UCN2Q96RP3 112 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 PANK2Q9BZ23 570 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 GPR62Q9BZJ7 368 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 CUEDC2Q9H467 287 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 RXFP1Q9HBX9 757 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 CD320Q9NPF0 282 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 TOPORSQ9NS56 1045 aaPredicted RBP12.19□□□□□ -0.46
COL4A6-205ENST00000468338 CACNG4Q9UBN1 327 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 PRKAG3Q9UGI9 489 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 ADAM28Q9UKQ2 775 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 CFAP45Q9UL16 551 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 PCDHA7Q9UN72 937 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 FAM50BQ9Y247 325 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 PDCD11Q14690 1871 aaKnown RBP12.19□□□□□ -0.46
COL4A6-205ENST00000468338 VWA8A3KMH1 1905 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-205ENST00000468338 K7ENM7 598 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 C1RP00736 705 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 ADRB2P07550 413 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 CNPP09543 421 aaKnown RBP12.18□□□□□ -0.46
COL4A6-205ENST00000468338 GAP43P17677 238 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 NMT1P30419 496 aaKnown RBP12.18□□□□□ -0.46
COL4A6-205ENST00000468338 SLC10A6Q3KNW5 377 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 CNNM4Q6P4Q7 775 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 CD300LGQ6UXG3 332 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 DYMQ7RTS9 669 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 ZBTB33Q86T24 672 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 SFR1Q86XK3 245 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 PDILTQ8N807 584 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 CASP10Q92851 521 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 HVCN1Q96D96 273 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 SNX27Q96L92 541 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 KLHL5Q96PQ7 755 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 USB1Q9BQ65 265 aaKnown RBP12.18□□□□□ -0.46
COL4A6-205ENST00000468338 TCHPQ9BT92 498 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 TNMDQ9H2S6 317 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 PLEKHA5Q9HAU0 1116 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 OLFML3Q9NRN5 406 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 MRPL17Q9NRX2 175 aaKnown RBP12.18□□□□□ -0.46
COL4A6-205ENST00000468338 CNTN3Q9P232 1028 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 SSX2IPQ9Y2D8 614 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 STYXL1Q9Y6J8 313 aa12.18□□□□□ -0.46
COL4A6-205ENST00000468338 A0A0B4J269 797 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 TTC26A0AVF1 554 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 CASTOR2A6NHX0 329 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 KIF4AO95239 1232 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 SRGAP2BP0DMP2 458 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 GLUD2P49448 558 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 YARSP54577 528 aaKnown RBP12.17□□□□□ -0.46
COL4A6-205ENST00000468338 ZP2Q05996 745 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 SOX4Q06945 474 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-205ENST00000468338 CLUL1Q15846 466 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 UPP1Q16831 310 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 USP41Q3LFD5 358 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 FOXD4L6Q3SYB3 417 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-205ENST00000468338 ZC2HC1CQ53FD0 456 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-205ENST00000468338 GLRA4Q5JXX5 417 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 RESP18Q5W5W9 173 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 DCLRE1AQ6PJP8 1040 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 FOXD4L3Q6VB84 417 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-205ENST00000468338 PPFIBP1Q86W92 1011 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 ADHFE1Q8IWW8 467 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 RABGGTAQ92696 567 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 UROC1Q96N76 676 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 ZHX3Q9H4I2 956 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 ANKFY1Q9P2R3 1169 aa12.17□□□□□ -0.46
COL4A6-205ENST00000468338 MTCL1Q9Y4B5 1905 aaKnown RBP12.17□□□□□ -0.46
COL4A6-205ENST00000468338 HNRNPDLO14979 420 aaKnown RBP12.16□□□□□ -0.46
COL4A6-205ENST00000468338 OGTO15294 1046 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 TEX28O15482 410 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 ATP9BO43861 1147 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 TADA2AO75478 443 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 PAPLNO95428 1278 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 URODP06132 367 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 CLTAP09496 248 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 IGFBP6P24592 240 aaPredicted RBP12.16□□□□□ -0.46
COL4A6-205ENST00000468338 LIG4P49917 911 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 CLCN4P51793 760 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 OSTNP61366 133 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 POU5F1Q01860 360 aaKnown RBP12.16□□□□□ -0.46
COL4A6-205ENST00000468338 ZBTB6Q15916 424 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 KYAT1Q16773 422 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 GJD3Q8N144 294 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 IQUBQ8NA54 791 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 EMILIN2Q9BXX0 1053 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 TRIM9Q9C026 710 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.16□□□□□ -0.46
COL4A6-205ENST00000468338 SLC38A7Q9NVC3 462 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 FNIP2Q9P278 1114 aa12.16□□□□□ -0.46
COL4A6-205ENST00000468338 USP15Q9Y4E8 981 aaPredicted RBP12.16□□□□□ -0.46
COL4A6-205ENST00000468338 SF3B1O75533 1304 aaKnown RBP eCLIP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms