RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 I3L4J1 428 aa18.63■□□□□ 0.57
SSBP1-207ENST00000468267 ADAM12O43184 909 aa18.63■□□□□ 0.57
SSBP1-207ENST00000468267 CUTAO60888 179 aa18.63■□□□□ 0.57
SSBP1-207ENST00000468267 TKTP29401 623 aaKnown RBP18.63■□□□□ 0.57
SSBP1-207ENST00000468267 BRCC3P46736 316 aa18.63■□□□□ 0.57
SSBP1-207ENST00000468267 ZXDAP98168 799 aa18.63■□□□□ 0.57
SSBP1-207ENST00000468267 PKP1Q13835 747 aa18.63■□□□□ 0.57
SSBP1-207ENST00000468267 ENOX2Q16206 610 aaKnown RBP18.63■□□□□ 0.57
SSBP1-207ENST00000468267 ZBTB41Q5SVQ8 909 aa18.63■□□□□ 0.57
SSBP1-207ENST00000468267 ZDHHC14Q8IZN3 488 aa18.63■□□□□ 0.57
SSBP1-207ENST00000468267 PDILTQ8N807 584 aa18.63■□□□□ 0.57
SSBP1-207ENST00000468267 ZNF707Q96C28 371 aaPredicted RBP18.63■□□□□ 0.57
SSBP1-207ENST00000468267 MSTO1Q9BUK6 570 aa18.63■□□□□ 0.57
SSBP1-207ENST00000468267 STRA6Q9BX79 667 aa18.63■□□□□ 0.57
SSBP1-207ENST00000468267 LACTBL1A8MY62 500 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 PPP1R37O75864 691 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 ADRB2P07550 413 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 RAB33AQ14088 237 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 ZBTB6Q15916 424 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 PTPN21Q16825 1174 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 FOXD4L6Q3SYB3 417 aaPredicted RBP18.62■□□□□ 0.57
SSBP1-207ENST00000468267 ATL3Q6DD88 541 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 FOXD4L3Q6VB84 417 aaPredicted RBP18.62■□□□□ 0.57
SSBP1-207ENST00000468267 CCDC149Q6ZUS6 474 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 ANKS3Q6ZW76 656 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 TDRD5Q8NAT2 981 aaKnown RBP18.62■□□□□ 0.57
SSBP1-207ENST00000468267 HVCN1Q96D96 273 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 TSPAN18Q96SJ8 248 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 MRPL44Q9H9J2 332 aaKnown RBP18.62■□□□□ 0.57
SSBP1-207ENST00000468267 RPF1Q9H9Y2 349 aaKnown RBP18.62■□□□□ 0.57
SSBP1-207ENST00000468267 ZDHHC7Q9NXF8 308 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 MTRRQ9UBK8 725 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 TUBGCP4Q9UGJ1 667 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 RAPGEFL1Q9UHV5 662 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 FBXW11Q9UKB1 542 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.62■□□□□ 0.57
SSBP1-207ENST00000468267 BACE2Q9Y5Z0 518 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 STYXL1Q9Y6J8 313 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 ANK1P16157 1881 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 DOCK8Q8NF50 2099 aa18.62■□□□□ 0.57
SSBP1-207ENST00000468267 FRMD3A2A2Y4 597 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 ZMYND10O75800 440 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 CYP3A5P20815 502 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 OR1D2P34982 312 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 PPP2R3AQ06190 1150 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 SPAG1Q07617 926 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 E2F4Q16254 413 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 AXDND1Q5T1B0 1012 aaPredicted RBP18.61■□□□□ 0.57
SSBP1-207ENST00000468267 SLFN12LQ6IEE8 588 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 SHC4Q6S5L8 630 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 RSPO2Q6UXX9 243 aaPredicted RBP18.61■□□□□ 0.57
SSBP1-207ENST00000468267 OTOP3Q7RTS5 596 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 PLCD3Q8N3E9 789 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 KCNG4Q8TDN1 519 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 SMG7Q92540 1137 aaKnown RBP18.61■□□□□ 0.57
SSBP1-207ENST00000468267 KIF12Q96FN5 646 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 PRKD2Q9BZL6 878 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 WDR6Q9NNW5 1121 aaKnown RBP18.61■□□□□ 0.57
SSBP1-207ENST00000468267 OLFML3Q9NRN5 406 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 TBC1D7Q9P0N9 293 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 CPSF3Q9UKF6 684 aaKnown RBP18.61■□□□□ 0.57
SSBP1-207ENST00000468267 MUC6Q6W4X9 2439 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 ZNF318Q5VUA4 2279 aa18.61■□□□□ 0.57
SSBP1-207ENST00000468267 TISP43B9A030 160 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 SYN3O14994 580 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 IDEP14735 1019 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 LRPAP1P30533 357 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 ADALQ6DHV7 355 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 TRIM67Q6ZTA4 783 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 CD302Q8IX05 232 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 ACSF2Q96CM8 615 aaPredicted RBP18.6■□□□□ 0.57
SSBP1-207ENST00000468267 SUSD3Q96L08 255 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 CUEDC2Q9H467 287 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 PANK4Q9NVE7 773 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 KBTBD4Q9NVX7 518 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 LIMD1Q9UGP4 676 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 UBQLN1Q9UMX0 589 aaKnown RBP18.6■□□□□ 0.57
SSBP1-207ENST00000468267 NUB1Q9Y5A7 615 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 CDY1Q9Y6F8 540 aa18.6■□□□□ 0.57
SSBP1-207ENST00000468267 KCNA1Q09470 495 aa18.59■□□□□ 0.57
SSBP1-207ENST00000468267 MRPL58Q14197 206 aaKnown RBP18.59■□□□□ 0.57
SSBP1-207ENST00000468267 VARS2Q5ST30 1063 aaKnown RBP18.59■□□□□ 0.57
SSBP1-207ENST00000468267 L1TD1Q5T7N2 865 aaKnown RBP18.59■□□□□ 0.57
SSBP1-207ENST00000468267 TMEM130Q8N3G9 435 aa18.59■□□□□ 0.57
SSBP1-207ENST00000468267 IQUBQ8NA54 791 aa18.59■□□□□ 0.57
SSBP1-207ENST00000468267 STAMQ92783 540 aa18.59■□□□□ 0.57
SSBP1-207ENST00000468267 ACCSQ96QU6 501 aa18.59■□□□□ 0.57
SSBP1-207ENST00000468267 LRRC27Q9C0I9 530 aa18.59■□□□□ 0.57
SSBP1-207ENST00000468267 TNMDQ9H2S6 317 aa18.59■□□□□ 0.57
SSBP1-207ENST00000468267 IKZF4Q9H2S9 585 aa18.59■□□□□ 0.57
SSBP1-207ENST00000468267 AGO2Q9UKV8 859 aaKnown RBP18.59■□□□□ 0.57
SSBP1-207ENST00000468267 CFAP45Q9UL16 551 aa18.59■□□□□ 0.57
SSBP1-207ENST00000468267 EXOC7Q9UPT5 735 aa18.59■□□□□ 0.57
SSBP1-207ENST00000468267 PCDHB13Q9Y5F0 798 aa18.59■□□□□ 0.57
SSBP1-207ENST00000468267 CLUHO75153 1309 aa18.58■□□□□ 0.57
SSBP1-207ENST00000468267 TMEM221A6NGB7 291 aa18.58■□□□□ 0.56
SSBP1-207ENST00000468267 M0R296 226 aa18.58■□□□□ 0.56
SSBP1-207ENST00000468267 XPOTO43592 962 aaKnown RBP18.58■□□□□ 0.56
SSBP1-207ENST00000468267 TBC1D4O60343 1298 aa18.58■□□□□ 0.56
SSBP1-207ENST00000468267 GCNT3O95395 438 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms