RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 CALCAP01258 141 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 TFRCP02786 760 aaKnown RBP20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 HMGCRP04035 888 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 GALCP54803 685 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 POU5F1Q01860 360 aaKnown RBP20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 JADE1Q6IE81 842 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 KLHDC9Q8NEP7 349 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 ANKRD36BP1Q96IX9 119 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 PCDHB18PQ96TA0 734 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 CARD6Q9BX69 1037 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 CDC23Q9UJX2 597 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 INTUQ9ULD6 942 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 NPTXRO95502 500 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 TNNC2P02585 160 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 MYCNP04198 464 aaPredicted RBP20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 ASGR1P07306 291 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 NAP1L1P55209 391 aaKnown RBP20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 NAA30Q147X3 362 aaPredicted RBP20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 KCNA10Q16322 511 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 KYAT1Q16773 422 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 CCSAPQ6IQ19 270 aaPredicted RBP20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 GDF6Q6KF10 455 aaPredicted RBP20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 NME8Q8N427 588 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 DDX1Q92499 740 aaKnown RBP20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 EIF2AQ9BY44 585 aaKnown RBP20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 IMPG2Q9BZV3 1241 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 MROH7Q68CQ1 1323 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 CLSTN1O94985 981 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 MMEP08473 750 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 YY1P25490 414 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 GRM5P41594 1212 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 PDE6CP51160 858 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 FMO1Q01740 532 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 PCBP1Q15365 356 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 DCAF4L1Q3SXM0 396 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 PAPD7Q5XG87 772 aaKnown RBP20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 TAF2Q6P1X5 1199 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 ACAP3Q96P50 834 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 ALS2CR12Q96Q35 445 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 XYLT2Q9H1B5 865 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 ASB7Q9H672 318 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 SIX4Q9UIU6 781 aa20.17■□□□□ 0.82
CHRNA4-203ENST00000467563 ANO9A1A5B4 782 aa20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 TBXAS1P24557 533 aaPredicted RBP20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 CRYBB1P53674 252 aaPredicted RBP20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 NCBP1Q09161 790 aaKnown RBP20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 TRPC3Q13507 836 aa20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 SGSM1Q2NKQ1 1148 aa20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 NOTUMQ6P988 496 aa20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 SLC27A1Q6PCB7 646 aa20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 C1orf127Q8N9H9 656 aa20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 RAET1EQ8TD07 263 aa20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 ERO1AQ96HE7 468 aa20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 JRKLQ9Y4A0 524 aa20.16■□□□□ 0.82
CHRNA4-203ENST00000467563 DYNC1I1O14576 645 aa20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 CDR2Q01850 454 aa20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 WNT8BQ93098 351 aa20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 PCDHGC5Q9Y5F6 944 aa20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 MYH10P35580 1976 aa20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 CST5P28325 142 aaPredicted RBP20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 FAM47CQ5HY64 1035 aa20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 CXorf38Q8TB03 319 aa20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 CXCL16Q9H2A7 254 aa20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 V9GYY5 206 aaPredicted RBP20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 THSD7BQ9C0I4 1608 aa20.15■□□□□ 0.82
CHRNA4-203ENST00000467563 GRIN2DO15399 1336 aa20.14■□□□□ 0.82
CHRNA4-203ENST00000467563 PALMO75781 387 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 ABCB4P21439 1286 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 TUBB2AQ13885 445 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 ZNF699Q32M78 642 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 TMEM270Q6UE05 265 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 UBR7Q8N806 425 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 TUBB2BQ9BVA1 445 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 CELF4Q9BZC1 486 aaKnown RBP20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 NIF3L1Q9GZT8 377 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 ISCUQ9H1K1 167 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 SNTG2Q9NY99 539 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 DDX20Q9UHI6 824 aaKnown RBP20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 CNTN6Q9UQ52 1028 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 PIN4Q9Y237 131 aaKnown RBP20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 HES2Q9Y543 173 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 PCDHB4Q9Y5E5 795 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 GRID2IPA4D2P6 1211 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 FTLP02792 175 aaPredicted RBP20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 KRT19P08727 400 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 TMEM253P0C7T8 217 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 ZNF710Q8N1W2 664 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 PXYLP1Q8TE99 480 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 CCDC94Q9BW85 323 aaPredicted RBP20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 THAP2Q9H0W7 228 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 PCDHB2Q9Y5E7 798 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 SAR1BQ9Y6B6 198 aa20.14■□□□□ 0.81
CHRNA4-203ENST00000467563 A0A0A6YYK5 440 aaPredicted RBP20.13■□□□□ 0.81
CHRNA4-203ENST00000467563 SRGAP2O75044 1071 aa20.13■□□□□ 0.81
CHRNA4-203ENST00000467563 AXLP30530 894 aa20.13■□□□□ 0.81
CHRNA4-203ENST00000467563 MRPS6P82932 125 aaKnown RBP20.13■□□□□ 0.81
CHRNA4-203ENST00000467563 TMEM132DQ14C87 1099 aa20.13■□□□□ 0.81
CHRNA4-203ENST00000467563 MNS1Q8NEH6 495 aa20.13■□□□□ 0.81
CHRNA4-203ENST00000467563 ARHGEF26Q96DR7 871 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 305.2 ms