RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.02□□□□□ -0.17
COL4A1-202ENST00000467182 ARHGAP20Q9P2F6 1191 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 PCDHB2Q9Y5E7 798 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 SCN5AQ14524 2016 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 MEIS3P2A8K0S8 358 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 ESPNB1AK53 854 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 TLR3O15455 904 aaKnown RBP14.01□□□□□ -0.17
COL4A1-202ENST00000467182 NBNO60934 754 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 ZNF623O75123 536 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 ASS1P00966 412 aaKnown RBP14.01□□□□□ -0.17
COL4A1-202ENST00000467182 PLEKP08567 350 aaPredicted RBP14.01□□□□□ -0.17
COL4A1-202ENST00000467182 TMEM191BP0C7N4 346 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 KCNE1P15382 129 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 ATF7P17544 494 aaPredicted RBP14.01□□□□□ -0.17
COL4A1-202ENST00000467182 GUCY2FP51841 1108 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 YARSP54577 528 aaKnown RBP14.01□□□□□ -0.17
COL4A1-202ENST00000467182 MYL6P60660 151 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 TLE2Q04725 743 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 TMEM132DQ14C87 1099 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 ASTE1Q2TB18 679 aaPredicted RBP14.01□□□□□ -0.17
COL4A1-202ENST00000467182 TOGARAM2Q6ZUX3 1019 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 C17orf53Q8N3J3 647 aaPredicted RBP14.01□□□□□ -0.17
COL4A1-202ENST00000467182 KIF12Q96FN5 646 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 APOL6Q9BWW8 343 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 C11orf49Q9H6J7 331 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 KCND1Q9NSA2 647 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 NUB1Q9Y5A7 615 aa14.01□□□□□ -0.17
COL4A1-202ENST00000467182 FOXN3O00409 490 aaPredicted RBP14□□□□□ -0.17
COL4A1-202ENST00000467182 PTGESO14684 152 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 PHACTR2O75167 634 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 ZSCAN20P17040 1043 aaPredicted RBP14□□□□□ -0.17
COL4A1-202ENST00000467182 CAPN2P17655 700 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 SOX5P35711 763 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 PRKCIP41743 596 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 STAT1P42224 750 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 GCNT1Q02742 428 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 MAPK8IP2Q13387 824 aaPredicted RBP14□□□□□ -0.17
COL4A1-202ENST00000467182 TCTN1Q2MV58 587 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 AGMOQ6ZNB7 445 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 ZNF598Q86UK7 904 aaKnown RBP14□□□□□ -0.17
COL4A1-202ENST00000467182 UBR7Q8N806 425 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 GSTCDQ8NEC7 633 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 SHC3Q92529 594 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 PAWRQ96IZ0 340 aaKnown RBP14□□□□□ -0.17
COL4A1-202ENST00000467182 SPAG5Q96R06 1193 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 ADAM2Q99965 735 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 MCOLN1Q9GZU1 580 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 WNT8AQ9H1J5 351 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 RGS18Q9NS28 235 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 KLK14Q9P0G3 267 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 PARP2Q9UGN5 583 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 TBX21Q9UL17 535 aa14□□□□□ -0.17
COL4A1-202ENST00000467182 A0A0U1RQF3 1178 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 SMIM28A0A1B0GU29 152 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 ITGB3P05106 788 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 SERPING1P05155 500 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 ITGA4P13612 1032 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 ACO1P21399 889 aaKnown RBP13.99□□□□□ -0.17
COL4A1-202ENST00000467182 RAB27AP51159 221 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 MFAP3P55082 362 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 NOP14P78316 857 aaKnown RBP13.99□□□□□ -0.17
COL4A1-202ENST00000467182 NAB2Q15742 525 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 ASIC2Q16515 512 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 ARHGAP44Q17R89 818 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 LRRC26Q2I0M4 334 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
COL4A1-202ENST00000467182 PLEKHG4Q58EX7 1191 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 GLRA4Q5JXX5 417 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 FAM71AQ8IYT1 594 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 PPM1KQ8N3J5 372 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 LPPQ93052 612 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 C18orf25Q96B23 403 aaPredicted RBP13.99□□□□□ -0.17
COL4A1-202ENST00000467182 TSPAN18Q96SJ8 248 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 ARID3AQ99856 593 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 SYT11Q9BT88 431 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 IFIH1Q9BYX4 1025 aaKnown RBP13.99□□□□□ -0.17
COL4A1-202ENST00000467182 VRTNQ9H8Y1 702 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 NHEJ1Q9H9Q4 299 aaPredicted RBP13.99□□□□□ -0.17
COL4A1-202ENST00000467182 RNF19AQ9NV58 838 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 ZNHIT6Q9NWK9 470 aaKnown RBP13.99□□□□□ -0.17
COL4A1-202ENST00000467182 MIOSQ9NXC5 875 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 DPP3Q9NY33 737 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 TUBGCP4Q9UGJ1 667 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 ITGA11Q9UKX5 1188 aa13.99□□□□□ -0.17
COL4A1-202ENST00000467182 REXO2Q9Y3B8 237 aaKnown RBP13.99□□□□□ -0.17
COL4A1-202ENST00000467182 SSU72P8A0A1W2PR75 194 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 USP27XA6NNY8 438 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 DCDC2CA8MYV0 355 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 C9IYK1 514 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 PPEF2O14830 753 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 ZNF263O14978 683 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 NRDCO43847 1150 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 EVI5O60447 810 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 GFPT2O94808 682 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 STAU1O95793 577 aaKnown RBP13.98□□□□□ -0.17
COL4A1-202ENST00000467182 CXCL10P02778 98 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 FERP16591 822 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 POLR2BP30876 1174 aaKnown RBP13.98□□□□□ -0.17
COL4A1-202ENST00000467182 EIF4A3P38919 411 aaKnown RBP13.98□□□□□ -0.17
COL4A1-202ENST00000467182 AFF1P51825 1210 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms