RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 TMEM8AQ9HCN3 771 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 DPP3Q9NY33 737 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.65■□□□□ 0.42
HLA-C-205ENST00000466892 P4HA2O15460 535 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 GALTP07902 379 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 ZNF18P17022 549 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 DNAJB2P25686 324 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 BMPR1AP36894 532 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 BCAR1P56945 870 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 CETN1Q12798 172 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 ZACNQ401N2 412 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 TCP11X2Q5H9J9 407 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 SPOUT1Q5T280 376 aaKnown RBP17.64■□□□□ 0.41
HLA-C-205ENST00000466892 KRT39Q6A163 491 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 DCLRE1AQ6PJP8 1040 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 KCNT2Q6UVM3 1135 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 C15orf39Q6ZRI6 1047 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 C18orf25Q96B23 403 aaPredicted RBP17.64■□□□□ 0.41
HLA-C-205ENST00000466892 COLEC11Q9BWP8 271 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 MTMR12Q9C0I1 747 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 CXCL16Q9H2A7 254 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 CBX8Q9HC52 389 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 FANCLQ9NW38 375 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 TUBGCP4Q9UGJ1 667 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 FAN1Q9Y2M0 1017 aa17.64■□□□□ 0.41
HLA-C-205ENST00000466892 YBX2Q9Y2T7 364 aaKnown RBP17.64■□□□□ 0.41
HLA-C-205ENST00000466892 R3HCC1Q9Y3T6 440 aaKnown RBP17.64■□□□□ 0.41
HLA-C-205ENST00000466892 RALGAPA2Q2PPJ7 1873 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 ANO9A1A5B4 782 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 LCHNA4D1U4 455 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 KCNJ18B7U540 433 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 PODXLO00592 558 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 STAU1O95793 577 aaKnown RBP17.63■□□□□ 0.41
HLA-C-205ENST00000466892 TPM2P07951 284 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 ERVK-21P61565 698 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 DLG4P78352 724 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 RBP5P82980 135 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 TAP1Q03518 808 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 SOX4Q06945 474 aaPredicted RBP17.63■□□□□ 0.41
HLA-C-205ENST00000466892 ELAVL2Q12926 359 aaKnown RBP17.63■□□□□ 0.41
HLA-C-205ENST00000466892 KCNJ12Q14500 433 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 DCAF17Q5H9S7 520 aaPredicted RBP17.63■□□□□ 0.41
HLA-C-205ENST00000466892 C1orf220Q5T0J3 134 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 TCERG1LQ5VWI1 586 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 PPP2R2DQ66LE6 453 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 TRAPPC11Q7Z392 1133 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 C1orf127Q8N9H9 656 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 COLGALT1Q8NBJ5 622 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 TAF4BQ92750 862 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 TIFAQ96CG3 184 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 ZNF560Q96MR9 790 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 C11orf84Q9BUA3 381 aaPredicted RBP17.63■□□□□ 0.41
HLA-C-205ENST00000466892 SAMSN1Q9NSI8 373 aaKnown RBP17.63■□□□□ 0.41
HLA-C-205ENST00000466892 SPG21Q9NZD8 308 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 PTPRJQ12913 1337 aa17.63■□□□□ 0.41
HLA-C-205ENST00000466892 RANBP2P49792 3224 aaKnown RBP17.62■□□□□ 0.41
HLA-C-205ENST00000466892 ARHGEF37A1IGU5 675 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 CASTOR2A6NHX0 329 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 LRRC10BA6NIK2 292 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 GOLGA6L19H0YKK7 550 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 PIRO00625 290 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 NRP1O14786 923 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 TRAPPC3O43617 180 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 C4BPAP04003 597 aaKnown RBP17.62■□□□□ 0.41
HLA-C-205ENST00000466892 ATICP31939 592 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 PBX2P40425 430 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 MTIF2P46199 727 aaKnown RBP17.62■□□□□ 0.41
HLA-C-205ENST00000466892 OR1G1P47890 313 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 SLC11A1P49279 550 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 MXI1P50539 228 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 CLCNKBP51801 687 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 PLCB3Q01970 1234 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 MAN2A1Q16706 1144 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 C9orf57Q5W0N0 161 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 GPR153Q6NV75 609 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 SV2AQ7L0J3 742 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 SLC39A11Q8N1S5 342 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 OR5B17Q8NGF7 314 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 CXorf38Q8TB03 319 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 FAXDC2Q96IV6 333 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 POP1Q99575 1024 aaKnown RBP17.62■□□□□ 0.41
HLA-C-205ENST00000466892 TUBGCP2Q9BSJ2 902 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 DNAJB4Q9UDY4 337 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 LZTS1Q9Y250 596 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 COQ4Q9Y3A0 265 aa17.62■□□□□ 0.41
HLA-C-205ENST00000466892 GTPBP10A4D1E9 387 aaKnown RBP17.61■□□□□ 0.41
HLA-C-205ENST00000466892 B4GALT3O60512 393 aa17.61■□□□□ 0.41
HLA-C-205ENST00000466892 PHACTR2O75167 634 aa17.61■□□□□ 0.41
HLA-C-205ENST00000466892 B3GAT3O94766 335 aa17.61■□□□□ 0.41
HLA-C-205ENST00000466892 AFPP02771 609 aaKnown RBP17.61■□□□□ 0.41
HLA-C-205ENST00000466892 TRIM49P0CI25 452 aa17.61■□□□□ 0.41
HLA-C-205ENST00000466892 TRIM49CP0CI26 452 aa17.61■□□□□ 0.41
HLA-C-205ENST00000466892 MYOGP15173 224 aa17.61■□□□□ 0.41
HLA-C-205ENST00000466892 AARSP49588 968 aaKnown RBP eCLIP17.61■□□□□ 0.41
HLA-C-205ENST00000466892 KRT17Q04695 432 aa17.61■□□□□ 0.41
HLA-C-205ENST00000466892 UBE3AQ05086 875 aa17.61■□□□□ 0.41
HLA-C-205ENST00000466892 PPP3CAQ08209 521 aa17.61■□□□□ 0.41
HLA-C-205ENST00000466892 MYO1EQ12965 1108 aa17.61■□□□□ 0.41
HLA-C-205ENST00000466892 BIRC3Q13489 604 aa17.61■□□□□ 0.41
HLA-C-205ENST00000466892 TRPC3Q13507 836 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms