RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 APPL2Q8NEU8 664 aa19.12■□□□□ 0.65
COL7A1-206ENST00000466591 ST13P5Q8NFI4 369 aaPredicted RBP19.12■□□□□ 0.65
COL7A1-206ENST00000466591 C18orf25Q96B23 403 aaPredicted RBP19.12■□□□□ 0.65
COL7A1-206ENST00000466591 FAM212AQ96EL1 285 aa19.12■□□□□ 0.65
COL7A1-206ENST00000466591 TBC1D32Q96NH3 1257 aa19.12■□□□□ 0.65
COL7A1-206ENST00000466591 PHOX2BQ99453 314 aa19.12■□□□□ 0.65
COL7A1-206ENST00000466591 NTPCRQ9BSD7 190 aaKnown RBP19.12■□□□□ 0.65
COL7A1-206ENST00000466591 PARVGQ9HBI0 331 aa19.12■□□□□ 0.65
COL7A1-206ENST00000466591 CNTN3Q9P232 1028 aa19.12■□□□□ 0.65
COL7A1-206ENST00000466591 MRPS23Q9Y3D9 190 aaKnown RBP19.12■□□□□ 0.65
COL7A1-206ENST00000466591 GFRA3O60609 400 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 CPB1P15086 417 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 AOC1P19801 751 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 SCP2P22307 547 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 PROZP22891 400 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 LONP1P36776 959 aaKnown RBP19.11■□□□□ 0.65
COL7A1-206ENST00000466591 SOX4Q06945 474 aaPredicted RBP19.11■□□□□ 0.65
COL7A1-206ENST00000466591 SF3A1Q15459 793 aaKnown RBP19.11■□□□□ 0.65
COL7A1-206ENST00000466591 CTXN3Q4LDR2 81 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 RTL10Q7L3V2 364 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 HAUS6Q7Z4H7 955 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 C3orf58Q8NDZ4 430 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 KIF12Q96FN5 646 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 ZMAT2Q96NC0 199 aaKnown RBP19.11■□□□□ 0.65
COL7A1-206ENST00000466591 REEP2Q9BRK0 252 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 CYP4F11Q9HBI6 524 aa19.11■□□□□ 0.65
COL7A1-206ENST00000466591 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.11■□□□□ 0.65
COL7A1-206ENST00000466591 MTCL1Q9Y4B5 1905 aaKnown RBP19.11■□□□□ 0.65
COL7A1-206ENST00000466591 CLTAP09496 248 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 CXCL8P10145 99 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 ABCD1P33897 745 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 ROR1Q01973 937 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 KARSQ15046 597 aaKnown RBP19.1■□□□□ 0.65
COL7A1-206ENST00000466591 ALKAL1Q6UXT8 129 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 USP37Q86T82 979 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 GPR152Q8TDT2 470 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 ING5Q8WYH8 240 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 FGF13Q92913 245 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 SHDQ96IW2 340 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 RPF1Q9H9Y2 349 aaKnown RBP19.1■□□□□ 0.65
COL7A1-206ENST00000466591 ARHGEF3Q9NR81 526 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 CCDC39Q9UFE4 941 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 ZDBF2Q9HCK1 2354 aa19.1■□□□□ 0.65
COL7A1-206ENST00000466591 TRAK2O60296 914 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 PLCG1P19174 1290 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 NCKAP1LP55160 1127 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 SPAG1Q07617 926 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 MCL1Q07820 350 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 HTR4Q13639 388 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 XKR4Q5GH76 650 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 SPECC1Q5M775 1068 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 CWF19L1Q69YN2 538 aaKnown RBP19.09■□□□□ 0.65
COL7A1-206ENST00000466591 IQCEQ6IPM2 695 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 DSTYKQ6XUX3 929 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 KRI1Q8N9T8 703 aaKnown RBP19.09■□□□□ 0.65
COL7A1-206ENST00000466591 ZNF461Q8TAF7 563 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 MSTO1Q9BUK6 570 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 TBC1D17Q9HA65 648 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 PLEKHA5Q9HAU0 1116 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 TUBGCP4Q9UGJ1 667 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 MYH11P35749 1972 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 TRIOO75962 3097 aa19.09■□□□□ 0.65
COL7A1-206ENST00000466591 PTPN2P17706 415 aa19.08■□□□□ 0.64
COL7A1-206ENST00000466591 IGFBP6P24592 240 aaPredicted RBP19.08■□□□□ 0.64
COL7A1-206ENST00000466591 MCM6Q14566 821 aa19.08■□□□□ 0.64
COL7A1-206ENST00000466591 SLC10A6Q3KNW5 377 aa19.08■□□□□ 0.64
COL7A1-206ENST00000466591 LARP4BQ92615 738 aaKnown RBP19.08■□□□□ 0.64
COL7A1-206ENST00000466591 RAD54LQ92698 747 aa19.08■□□□□ 0.64
COL7A1-206ENST00000466591 HCFC1R1Q9NWW0 138 aa19.08■□□□□ 0.64
COL7A1-206ENST00000466591 KCNH3Q9ULD8 1083 aa19.08■□□□□ 0.64
COL7A1-206ENST00000466591 TBX20Q9UMR3 447 aa19.08■□□□□ 0.64
COL7A1-206ENST00000466591 UBQLN1Q9UMX0 589 aaKnown RBP19.08■□□□□ 0.64
COL7A1-206ENST00000466591 YWHAHQ04917 246 aaPredicted RBP19.07■□□□□ 0.64
COL7A1-206ENST00000466591 CYP4A22Q5TCH4 519 aa19.07■□□□□ 0.64
COL7A1-206ENST00000466591 PARM1Q6UWI2 310 aa19.07■□□□□ 0.64
COL7A1-206ENST00000466591 RSPO2Q6UXX9 243 aaPredicted RBP19.07■□□□□ 0.64
COL7A1-206ENST00000466591 PDZD4Q76G19 769 aaPredicted RBP19.07■□□□□ 0.64
COL7A1-206ENST00000466591 DTWD2Q8NBA8 298 aa19.07■□□□□ 0.64
COL7A1-206ENST00000466591 ITFG1Q8TB96 612 aa19.07■□□□□ 0.64
COL7A1-206ENST00000466591 SUSD3Q96L08 255 aa19.07■□□□□ 0.64
COL7A1-206ENST00000466591 KXD1Q9BQD3 176 aa19.07■□□□□ 0.64
COL7A1-206ENST00000466591 CORO1BQ9BR76 489 aa19.07■□□□□ 0.64
COL7A1-206ENST00000466591 CITO14578 2027 aa19.07■□□□□ 0.64
COL7A1-206ENST00000466591 WDR27A2RRH5 827 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 ANHXE9PGG2 379 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 ABLIM1O14639 778 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 OGTO15294 1046 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 PI15O43692 258 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 PAPLNO95428 1278 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 RHOP08100 348 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 POU2F2P09086 479 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 PFKPQ01813 784 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 CEBPZQ03701 1054 aaKnown RBP19.06■□□□□ 0.64
COL7A1-206ENST00000466591 ARSHQ5FYA8 562 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 TPGS2Q68CL5 300 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 SLC8B1Q6J4K2 584 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 CCDC105Q8IYK2 499 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 BEST2Q8NFU1 509 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 DDX12PQ92771 950 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 FGF14Q92915 247 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms