RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 VN1R3Q9BXE9 311 aa15.07■□□□□ 0
HDAC6-215ENST00000465457 TBC1D17Q9HA65 648 aa15.07■□□□□ 0
HDAC6-215ENST00000465457 DZANK1Q9NVP4 752 aa15.07■□□□□ 0
HDAC6-215ENST00000465457 SAMM50Q9Y512 469 aa15.07■□□□□ 0
HDAC6-215ENST00000465457 AKR1B15C9JRZ8 316 aaPredicted RBP15.06■□□□□ 0
HDAC6-215ENST00000465457 DDX39AO00148 427 aaKnown RBP15.06■□□□□ 0
HDAC6-215ENST00000465457 STK25O00506 426 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 STX10O60499 249 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 C22orf31O95567 290 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 TUBB4AP04350 444 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 SP9P0CG40 484 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 ATP4AP20648 1035 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 MTIF2P46199 727 aaKnown RBP15.06■□□□□ 0
HDAC6-215ENST00000465457 ZNF131P52739 623 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 BCAR1P56945 870 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 PSMC5P62195 406 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 ALCAMQ13740 583 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 ZCWPW2Q504Y3 356 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 FKBP15Q5T1M5 1219 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 C1orf186Q6ZWK4 172 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 EPM2AIP1Q7L775 607 aaPredicted RBP15.06■□□□□ 0
HDAC6-215ENST00000465457 GPR149Q86SP6 731 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 ECHDC2Q86YB7 292 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 C4orf19Q8IY42 314 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 ABI1Q8IZP0 508 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 SUMF1Q8NBK3 374 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 RUBCNQ92622 972 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 TUBGCP2Q9BSJ2 902 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 NUP58Q9BVL2 599 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 PARVGQ9HBI0 331 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 ANKEF1Q9NU02 776 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 TAB2Q9NYJ8 693 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 DLGAP2Q9P1A6 1054 aa15.06■□□□□ 0
HDAC6-215ENST00000465457 RALYQ9UKM9 306 aaKnown RBP15.06■□□□□ 0
HDAC6-215ENST00000465457 IGKV6D-21A0A0A0MT36 114 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 KIF2AO00139 706 aaPredicted RBP15.05■□□□□ -0
HDAC6-215ENST00000465457 ARHGAP6O43182 974 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 CALUO43852 315 aaPredicted RBP15.05■□□□□ -0
HDAC6-215ENST00000465457 B4GALT3O60512 393 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 LRRN2O75325 713 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 MAPTP10636 758 aaKnown RBP15.05■□□□□ -0
HDAC6-215ENST00000465457 GLULP15104 373 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 FGFR4P22455 802 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 CLCN3P51790 818 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 CRYBB1P53674 252 aaPredicted RBP15.05■□□□□ -0
HDAC6-215ENST00000465457 PPP2R3AQ06190 1150 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 TRMT1LQ7Z2T5 733 aaKnown RBP15.05■□□□□ -0
HDAC6-215ENST00000465457 ZNF598Q86UK7 904 aaKnown RBP15.05■□□□□ -0
HDAC6-215ENST00000465457 SFR1Q86XK3 245 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 ZC3H3Q8IXZ2 948 aaKnown RBP15.05■□□□□ -0
HDAC6-215ENST00000465457 HPS3Q969F9 1004 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 ACSF2Q96CM8 615 aaPredicted RBP15.05■□□□□ -0
HDAC6-215ENST00000465457 RUSC1Q9BVN2 902 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 VPS16Q9H269 839 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 SEMA4AQ9H3S1 761 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 ZHX3Q9H4I2 956 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 TRAF3IP3Q9Y228 551 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 PCDHA10Q9Y5I2 948 aa15.05■□□□□ -0
HDAC6-215ENST00000465457 PDXKO00764 312 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 MFAP3LO75121 409 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 ZC3H11AO75152 810 aaKnown RBP eCLIP15.04■□□□□ -0
HDAC6-215ENST00000465457 PSAPP07602 524 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 RPL13P26373 211 aaKnown RBP15.04■□□□□ -0
HDAC6-215ENST00000465457 MARSP56192 900 aaKnown RBP15.04■□□□□ -0
HDAC6-215ENST00000465457 UBXN1Q04323 297 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 NFIL3Q16649 462 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 MAN2A1Q16706 1144 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 OTOP3Q7RTS5 596 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 MAML2Q8IZL2 1156 aaPredicted RBP15.04■□□□□ -0
HDAC6-215ENST00000465457 GOLGA5Q8TBA6 731 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 PIGOQ8TEQ8 1089 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 SCFD1Q8WVM8 642 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 TMEM169Q96HH4 297 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 SFXN1Q9H9B4 322 aa15.04■□□□□ -0
HDAC6-215ENST00000465457 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
HDAC6-215ENST00000465457 COL1A2P08123 1366 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 NPHP3-ACAD11A0A0J9YXS1 232 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 GOLGA6L9A6NEM1 432 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 MEIS3P2A8K0S8 358 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 BACH1O14867 736 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 CETN3O15182 167 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 TEX33O43247 280 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 HOXA2O43364 376 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 HBP1O60381 514 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 ATG7O95352 703 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 MYBP10242 640 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 CTSAP10619 480 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 ARID5BQ14865 1188 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 PTPN14Q15678 1187 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 KNOP1Q1ED39 458 aaKnown RBP15.03■□□□□ -0
HDAC6-215ENST00000465457 FIGNQ5HY92 759 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 OTUD6AQ7L8S5 288 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 METTL13Q8N6R0 699 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 ZNF507Q8TCN5 953 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 DRC1Q96MC2 740 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 ERGIC2Q96RQ1 377 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 BAG1Q99933 345 aaPredicted RBP15.03■□□□□ -0
HDAC6-215ENST00000465457 FOXQ1Q9C009 403 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 KCTD10Q9H3F6 313 aa15.03■□□□□ -0
HDAC6-215ENST00000465457 MRPL44Q9H9J2 332 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms