RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 FER1L6Q2WGJ9 1857 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 ACSL3O95573 720 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 ZNF280AP59817 542 aaPredicted RBP19.53■□□□□ 0.72
SYNE4-204ENST00000465425 EMC2Q15006 297 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 TDRD10Q5VZ19 366 aaKnown RBP19.53■□□□□ 0.72
SYNE4-204ENST00000465425 ICE2Q659A1 982 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 DCAF15Q66K64 600 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 ABHD15Q6UXT9 468 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 ANKS4BQ8N8V4 417 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 ADAM7Q9H2U9 754 aa19.53■□□□□ 0.72
SYNE4-204ENST00000465425 ZNFX1Q9P2E3 1918 aaKnown RBP19.52■□□□□ 0.72
SYNE4-204ENST00000465425 NLRP11P59045 1033 aaKnown RBP19.52■□□□□ 0.72
SYNE4-204ENST00000465425 CLDN10P78369 228 aa19.52■□□□□ 0.72
SYNE4-204ENST00000465425 AUHQ13825 339 aaKnown RBP19.52■□□□□ 0.72
SYNE4-204ENST00000465425 NBPF12Q5TAG4 269 aaPredicted RBP19.52■□□□□ 0.72
SYNE4-204ENST00000465425 SUGP1Q8IWZ8 645 aaKnown RBP19.52■□□□□ 0.72
SYNE4-204ENST00000465425 SCYL3Q8IZE3 742 aa19.52■□□□□ 0.72
SYNE4-204ENST00000465425 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.52■□□□□ 0.72
SYNE4-204ENST00000465425 ATXN2LQ8WWM7 1075 aaKnown RBP19.52■□□□□ 0.72
SYNE4-204ENST00000465425 STAM2O75886 525 aa19.52■□□□□ 0.71
SYNE4-204ENST00000465425 CYP1A1P04798 512 aaPredicted RBP19.52■□□□□ 0.71
SYNE4-204ENST00000465425 ATF2P15336 505 aa19.52■□□□□ 0.71
SYNE4-204ENST00000465425 HMGCS2P54868 508 aa19.52■□□□□ 0.71
SYNE4-204ENST00000465425 SPOPLQ6IQ16 392 aa19.52■□□□□ 0.71
SYNE4-204ENST00000465425 MFSD5Q6N075 450 aa19.52■□□□□ 0.71
SYNE4-204ENST00000465425 ZNF317Q96PQ6 595 aaPredicted RBP19.52■□□□□ 0.71
SYNE4-204ENST00000465425 PRMT1Q99873 361 aaKnown RBP19.52■□□□□ 0.71
SYNE4-204ENST00000465425 OSBPL7Q9BZF2 842 aa19.52■□□□□ 0.71
SYNE4-204ENST00000465425 MRPL47Q9HD33 250 aaKnown RBP19.52■□□□□ 0.71
SYNE4-204ENST00000465425 RBAKQ9NYW8 714 aaPredicted RBP19.52■□□□□ 0.71
SYNE4-204ENST00000465425 HACL1Q9UJ83 578 aa19.52■□□□□ 0.71
SYNE4-204ENST00000465425 ZNF214Q9UL59 606 aaPredicted RBP19.52■□□□□ 0.71
SYNE4-204ENST00000465425 LRRIQ4A6NIV6 560 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 PROSCO94903 275 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 C4BPAP04003 597 aaKnown RBP19.51■□□□□ 0.71
SYNE4-204ENST00000465425 PTK6Q13882 451 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 TRIP13Q15645 432 aaPredicted RBP19.51■□□□□ 0.71
SYNE4-204ENST00000465425 LONRF1Q17RB8 773 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 LLGL2Q6P1M3 1020 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 TMEM270Q6UE05 265 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 MON1BQ7L1V2 547 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 SAMD7Q7Z3H4 446 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 PASD1Q8IV76 773 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 CCDC197Q8NCU1 140 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 REPS2Q8NFH8 660 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 ATL2Q8NHH9 583 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 DEPTORQ8TB45 409 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 P3H4Q92791 437 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 ZKSCAN4Q969J2 545 aaPredicted RBP19.51■□□□□ 0.71
SYNE4-204ENST00000465425 TMEM143Q96AN5 459 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 DDX27Q96GQ7 796 aaKnown RBP19.51■□□□□ 0.71
SYNE4-204ENST00000465425 C11orf70Q9BRQ4 267 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 DDX23Q9BUQ8 820 aaKnown RBP19.51■□□□□ 0.71
SYNE4-204ENST00000465425 DCLK3Q9C098 648 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 ACAD9Q9H845 621 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 HOMER3Q9NSC5 361 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 CYP39A1Q9NYL5 469 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 ADAM22Q9P0K1 906 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 PCDHB4Q9Y5E5 795 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 SUPT20HL2P0C7V6 817 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 ATP5DP30049 168 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 GNA15P30679 374 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 DSG3P32926 999 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 ADCY8P40145 1251 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 CAV1Q03135 178 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 CUL2Q13617 745 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 SUPT20HL1Q3ZLR7 823 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 CCDC38Q502W7 563 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 SLFN12LQ6IEE8 588 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 TRIM72Q6ZMU5 477 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 SCLT1Q96NL6 688 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 WRNIP1Q96S55 665 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 HEMGNQ9BXL5 484 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 TEX13BQ9BXU2 312 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 SAMD15Q9P1V8 674 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 ANKFY1Q9P2R3 1169 aa19.51■□□□□ 0.71
SYNE4-204ENST00000465425 K7ERI5 159 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 PSTPIP1O43586 416 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 RPS12P25398 132 aaKnown RBP19.5■□□□□ 0.71
SYNE4-204ENST00000465425 SSR1P43307 286 aaKnown RBP19.5■□□□□ 0.71
SYNE4-204ENST00000465425 ITGA8P53708 1063 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 TMEM132BQ14DG7 1078 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 ANKRD20A8PQ5CZ79 823 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 RHOT1Q8IXI2 618 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 TRAIPQ9BWF2 469 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 A1CFQ9NQ94 594 aaKnown RBP19.5■□□□□ 0.71
SYNE4-204ENST00000465425 SPATA31C2B4DYI2 1134 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 TP73O15350 636 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 LDHAP00338 332 aaKnown RBP19.5■□□□□ 0.71
SYNE4-204ENST00000465425 VIMP08670 466 aaKnown RBP19.5■□□□□ 0.71
SYNE4-204ENST00000465425 RALAP11233 206 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 PTPRAP18433 802 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 CHKAP35790 457 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 TNFAIP8L3Q5GJ75 292 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 DAB2IPQ5VWQ8 1189 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 KCNV1Q6PIU1 500 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 MICALL2Q8IY33 904 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 DYDC1Q8WWB3 177 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 SLC7A3Q8WY07 619 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms