RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 NUBP1P53384 320 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 STK4Q13043 487 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 KNOP1Q1ED39 458 aaKnown RBP19■□□□□ 0.63
CPSF4-209ENST00000465132 TMC5Q6UXY8 1006 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 RBM43Q6ZSC3 357 aaKnown RBP19■□□□□ 0.63
CPSF4-209ENST00000465132 EPM2AIP1Q7L775 607 aaPredicted RBP19■□□□□ 0.63
CPSF4-209ENST00000465132 PLCD3Q8N3E9 789 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 FEZF2Q8TBJ5 459 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 KLHL5Q96PQ7 755 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 FAM193BQ96PV7 902 aaPredicted RBP19■□□□□ 0.63
CPSF4-209ENST00000465132 TSG101Q99816 390 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 TMEM175Q9BSA9 504 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 IRF2BPLQ9H1B7 796 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 SMOC2Q9H3U7 446 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 SFXN1Q9H9B4 322 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 UBN1Q9NPG3 1134 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 LIMD1Q9UGP4 676 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 MAN1B1Q9UKM7 699 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 FAN1Q9Y2M0 1017 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 CALUO43852 315 aaPredicted RBP18.99■□□□□ 0.63
CPSF4-209ENST00000465132 LILRB3O75022 631 aa18.99■□□□□ 0.63
CPSF4-209ENST00000465132 LDHAP00338 332 aaKnown RBP18.99■□□□□ 0.63
CPSF4-209ENST00000465132 MYBP10242 640 aa18.99■□□□□ 0.63
CPSF4-209ENST00000465132 ARF4P18085 180 aaPredicted RBP18.99■□□□□ 0.63
CPSF4-209ENST00000465132 MORC3Q14149 939 aa18.99■□□□□ 0.63
CPSF4-209ENST00000465132 AMHR2Q16671 573 aa18.99■□□□□ 0.63
CPSF4-209ENST00000465132 ZC2HC1CQ53FD0 456 aaPredicted RBP18.99■□□□□ 0.63
CPSF4-209ENST00000465132 GPR149Q86SP6 731 aa18.99■□□□□ 0.63
CPSF4-209ENST00000465132 DHTKD1Q96HY7 919 aaPredicted RBP18.99■□□□□ 0.63
CPSF4-209ENST00000465132 ACO2Q99798 780 aaKnown RBP18.99■□□□□ 0.63
CPSF4-209ENST00000465132 EMILIN2Q9BXX0 1053 aa18.99■□□□□ 0.63
CPSF4-209ENST00000465132 FAM86C1Q9NVL1 165 aa18.99■□□□□ 0.63
CPSF4-209ENST00000465132 BICDL2A1A5D9 508 aa18.98■□□□□ 0.63
CPSF4-209ENST00000465132 PDXKO00764 312 aa18.98■□□□□ 0.63
CPSF4-209ENST00000465132 NRP1O14786 923 aa18.98■□□□□ 0.63
CPSF4-209ENST00000465132 POMCP01189 267 aa18.98■□□□□ 0.63
CPSF4-209ENST00000465132 CNPP09543 421 aaKnown RBP18.98■□□□□ 0.63
CPSF4-209ENST00000465132 MCF2P10911 925 aa18.98■□□□□ 0.63
CPSF4-209ENST00000465132 RPL13P26373 211 aaKnown RBP18.98■□□□□ 0.63
CPSF4-209ENST00000465132 KLRC2P26717 231 aa18.98■□□□□ 0.63
CPSF4-209ENST00000465132 CLCN4P51793 760 aa18.98■□□□□ 0.63
CPSF4-209ENST00000465132 MPZL3Q6UWV2 235 aa18.98■□□□□ 0.63
CPSF4-209ENST00000465132 SMG8Q8ND04 991 aaKnown RBP18.98■□□□□ 0.63
CPSF4-209ENST00000465132 SCFD1Q8WVM8 642 aa18.98■□□□□ 0.63
CPSF4-209ENST00000465132 ATOH1Q92858 354 aaPredicted RBP18.98■□□□□ 0.63
CPSF4-209ENST00000465132 NAT10Q9H0A0 1025 aaKnown RBP18.98■□□□□ 0.63
CPSF4-209ENST00000465132 KIAA1586Q9HCI6 787 aa18.98■□□□□ 0.63
CPSF4-209ENST00000465132 PRPF6O94906 941 aaKnown RBP18.97■□□□□ 0.63
CPSF4-209ENST00000465132 CCDC192P0DO97 292 aa18.97■□□□□ 0.63
CPSF4-209ENST00000465132 ITGA4P13612 1032 aa18.97■□□□□ 0.63
CPSF4-209ENST00000465132 GARTP22102 1010 aa18.97■□□□□ 0.63
CPSF4-209ENST00000465132 MYBPC2Q14324 1141 aa18.97■□□□□ 0.63
CPSF4-209ENST00000465132 ZNF568Q3ZCX4 644 aa18.97■□□□□ 0.63
CPSF4-209ENST00000465132 KIAA0895Q8NCT3 520 aa18.97■□□□□ 0.63
CPSF4-209ENST00000465132 TARS2Q9BW92 718 aaKnown RBP18.97■□□□□ 0.63
CPSF4-209ENST00000465132 MRPL17Q9NRX2 175 aaKnown RBP18.97■□□□□ 0.63
CPSF4-209ENST00000465132 ANO10Q9NW15 660 aa18.97■□□□□ 0.63
CPSF4-209ENST00000465132 TMEM63CQ9P1W3 806 aa18.97■□□□□ 0.63
CPSF4-209ENST00000465132 IPPQ9Y573 584 aa18.97■□□□□ 0.63
CPSF4-209ENST00000465132 SPDYE4A6NLX3 237 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 BIN1O00499 593 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 INPPL1O15357 1258 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 GALR2O43603 387 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-209ENST00000465132 CAVIN2O95810 425 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 SOD2P04179 222 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 CASP5P51878 434 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 NLRP12P59046 1061 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 POU5F1Q01860 360 aaKnown RBP18.96■□□□□ 0.63
CPSF4-209ENST00000465132 LRRC63Q05C16 580 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 NOLC1Q14978 699 aaKnown RBP eCLIP18.96■□□□□ 0.63
CPSF4-209ENST00000465132 STX1AQ16623 288 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 FOXR2Q6PJQ5 311 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 CCDC149Q6ZUS6 474 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 TAS1R3Q7RTX0 852 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 COLGALT2Q8IYK4 626 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 TMEM105Q8N8V8 129 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 POMGNT1Q8WZA1 660 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 ERCC4Q92889 916 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-209ENST00000465132 HPS3Q969F9 1004 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 ACSF2Q96CM8 615 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-209ENST00000465132 CCDC94Q9BW85 323 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-209ENST00000465132 EIF2AQ9BY44 585 aaKnown RBP18.96■□□□□ 0.63
CPSF4-209ENST00000465132 RNF39Q9H2S5 420 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 PDZD7Q9H5P4 517 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 TOPORSQ9NS56 1045 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-209ENST00000465132 MARCH5Q9NX47 278 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 ANKFY1Q9P2R3 1169 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 GDAQ9Y2T3 454 aa18.96■□□□□ 0.63
CPSF4-209ENST00000465132 PRG3Q9Y2Y8 225 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-209ENST00000465132 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-209ENST00000465132 ARL5CA6NH57 179 aa18.95■□□□□ 0.62
CPSF4-209ENST00000465132 H0Y858 1186 aa18.95■□□□□ 0.62
CPSF4-209ENST00000465132 B4GALT5O43286 388 aa18.95■□□□□ 0.62
CPSF4-209ENST00000465132 FGFR1OPO95684 399 aaKnown RBP18.95■□□□□ 0.62
CPSF4-209ENST00000465132 URODP06132 367 aa18.95■□□□□ 0.62
CPSF4-209ENST00000465132 YARSP54577 528 aaKnown RBP18.95■□□□□ 0.62
CPSF4-209ENST00000465132 MCL1Q07820 350 aa18.95■□□□□ 0.62
CPSF4-209ENST00000465132 ARMCX5Q6P1M9 558 aa18.95■□□□□ 0.62
CPSF4-209ENST00000465132 C15orf39Q6ZRI6 1047 aa18.95■□□□□ 0.62
CPSF4-209ENST00000465132 OTOP3Q7RTS5 596 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms