RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 ATF2P15336 505 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 SLC9A1P19634 815 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 MARK3P27448 753 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 RPA1P27694 616 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 FLT3P36888 993 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 VHLP40337 213 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 SLC1A1P43005 524 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 RPL21P46778 160 aaKnown RBP7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 GDF10P55107 478 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 KCNJ2P63252 427 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 IFI35P80217 286 aaPredicted RBP7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 PTK6Q13882 451 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 RASA2Q15283 850 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 SPRED3Q2MJR0 410 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 GNASQ5JWF2 1037 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 TBC1D9BQ66K14 1250 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 ZNF804AQ7Z570 1209 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 USP37Q86T82 979 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 EXOC3L1Q86VI1 746 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 SLC13A5Q86YT5 568 aaPredicted RBP7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 SLC17A8Q8NDX2 589 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 PIP4K2CQ8TBX8 421 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 MIPOL1Q8TD10 442 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 LRRC8CQ8TDW0 803 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 KIFAP3Q92845 792 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 STMN2Q93045 179 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 SLC35C1Q96A29 364 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 NUDCD1Q96RS6 583 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 PIGSQ96S52 555 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 AGPAT1Q99943 283 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 CELF4Q9BZC1 486 aaKnown RBP7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 TRIM4Q9C037 500 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 MIS12Q9H081 205 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 EPB41L4BQ9H329 900 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 MMADHCQ9H3L0 296 aaPredicted RBP7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 ZHX3Q9H4I2 956 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 ALG2Q9H553 416 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 SUDS3Q9H7L9 328 aaPredicted RBP7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 PSTPIP2Q9H939 334 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 GPAMQ9HCL2 828 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 SSU72Q9NP77 194 aaKnown RBP7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 FGFR1OP2Q9NVK5 253 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 GRHL1Q9NZI5 618 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 APEX2Q9UBZ4 518 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 LNPEPQ9UIQ6 1025 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 DNAJC12Q9UKB3 198 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 CD2APQ9Y5K6 639 aa7.66□□□□□ -1.18
CLSTN1-204ENST00000464286 MAGEA13PA6NCF6 341 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 USP17L3A6NCW0 530 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 USP17L4A6NCW7 530 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 SMIM23A6NLE4 172 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 A8MXQ7 604 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 MPHOSPH10O00566 681 aaKnown RBP7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 NVLO15381 856 aaKnown RBP7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 PRPF4O43172 522 aaKnown RBP eCLIP7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 SPOPO43791 374 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 SLC37A4O43826 429 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 ECE2O60344 883 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 SORBS3O60504 671 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 EXOC3O60645 756 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 CCDC22O60826 627 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 FAM13AO94988 1023 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 RTN3O95197 1032 aaPredicted RBP7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 TDP2O95551 362 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 SHBGP04278 402 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 SETSIPP0DME0 302 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 MYBL1P10243 752 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 VEGFAP15692 232 aaPredicted RBP7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 PTPN4P29074 926 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 PEX19P40855 299 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 FMO5P49326 533 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 CDK8P49336 464 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 PEX5P50542 639 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 CLCN2P51788 898 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 RAD23BP54727 409 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 SLC12A3P55017 1021 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 RPS8P62241 208 aaKnown RBP7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 IRX4P78413 519 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 MYL7Q01449 175 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 OCRLQ01968 901 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 CUL3Q13618 768 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 RRP1BQ14684 758 aaKnown RBP7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 DRAP1Q14919 205 aaPredicted RBP7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 FRMPD4Q14CM0 1322 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 TLR1Q15399 786 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 SEPT7Q16181 437 aaKnown RBP7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 SLC45A4Q5BKX6 768 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 DAB2IPQ5VWQ8 1189 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 CCDC174Q6PII3 467 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 MTHFD1LQ6UB35 978 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 MIGA2Q7L4E1 593 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 USP17L1Q7RTZ2 530 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 PHLDB2Q86SQ0 1253 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 TDRPQ86YL5 185 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 SLC9A9Q8IVB4 645 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 PRELID2Q8N945 189 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 ASAP3Q8TDY4 903 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 EPS8L3Q8TE67 593 aaKnown RBP7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 RHBDD1Q8TEB9 315 aa7.65□□□□□ -1.18
CLSTN1-204ENST00000464286 TMEM174Q8WUU8 243 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms