RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 CD300LDQ6UXZ3 194 aa6.29□□□□□ -1.4
CD46-211ENST00000464082 RIOX2Q8IUF8 465 aa6.29□□□□□ -1.4
CD46-211ENST00000464082 ZNF444Q8N0Y2 327 aaPredicted RBP6.29□□□□□ -1.4
CD46-211ENST00000464082 RILPL2Q969X0 211 aa6.29□□□□□ -1.4
CD46-211ENST00000464082 SLF1Q9BQI6 1058 aa6.29□□□□□ -1.4
CD46-211ENST00000464082 NACAP1Q9BZK3 213 aa6.29□□□□□ -1.4
CD46-211ENST00000464082 SLC38A10Q9HBR0 1119 aa6.29□□□□□ -1.4
CD46-211ENST00000464082 SCN10AQ9Y5Y9 1956 aa6.29□□□□□ -1.4
CD46-211ENST00000464082 ASTN1O14525 1302 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 H0YGN5 161 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 NTRK1P04629 796 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 TSPY3P0CV98 308 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 TSPY8P0CW00 308 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 STAT3P40763 770 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 ITGA1P56199 1179 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 POU4F1Q01851 419 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 SURF1Q15526 300 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 SLFN13Q68D06 897 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 CWC27Q6UX04 472 aaKnown RBP6.28□□□□□ -1.4
CD46-211ENST00000464082 SKAP1Q86WV1 359 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 CIR1Q86X95 450 aaPredicted RBP6.28□□□□□ -1.4
CD46-211ENST00000464082 CPNE8Q86YQ8 564 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 ABRAQ8N0Z2 381 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 STAG1Q8WVM7 1258 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 PAWRQ96IZ0 340 aaKnown RBP6.28□□□□□ -1.4
CD46-211ENST00000464082 MAML3Q96JK9 1138 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 MROH8Q9H579 483 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 TCP11L1Q9NUJ3 509 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 VTI1BQ9UEU0 232 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 ADAMTS1Q9UHI8 967 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 SF3B6Q9Y3B4 125 aaKnown RBP6.28□□□□□ -1.4
CD46-211ENST00000464082 SCN5AQ14524 2016 aa6.28□□□□□ -1.4
CD46-211ENST00000464082 TSPY2A6NKD2 308 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 ADCY6O43306 1168 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 STRNO43815 780 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 PLA2G6O60733 806 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 SLC25A27O95847 323 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 TFRCP02786 760 aaKnown RBP6.27□□□□□ -1.41
CD46-211ENST00000464082 PGK2P07205 417 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 SNHG28P0DPA3 235 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 MCCP23508 829 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 ZNF165P49910 485 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 APOBRQ0VD83 1088 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 FHL2Q14192 279 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 PLS1Q14651 629 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 PPP2R5DQ14738 602 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 PRAMEF19Q5SWL8 479 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 AKNAD1Q5T1N1 836 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 WDR78Q5VTH9 848 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 SNRNP48Q6IEG0 339 aaKnown RBP6.27□□□□□ -1.41
CD46-211ENST00000464082 ETV3LQ6ZN32 361 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 KCTD1Q719H9 257 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 PRPF38AQ8NAV1 312 aaKnown RBP6.27□□□□□ -1.41
CD46-211ENST00000464082 TET1Q8NFU7 2136 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 CHMP4CQ96CF2 233 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 MMP19Q99542 508 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 TMEM47Q9BQJ4 181 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 TEX13BQ9BXU2 312 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 KATNBL1Q9H079 304 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 ZNF287Q9HBT7 754 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 RAVER2Q9HCJ3 691 aaKnown RBP6.27□□□□□ -1.41
CD46-211ENST00000464082 DDX20Q9UHI6 824 aaKnown RBP6.27□□□□□ -1.41
CD46-211ENST00000464082 FEM1BQ9UK73 627 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 PTPRSQ13332 1948 aa6.27□□□□□ -1.41
CD46-211ENST00000464082 TMEM232C9JQI7 657 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 RANBP6O60518 1105 aaKnown RBP6.26□□□□□ -1.41
CD46-211ENST00000464082 SLC3A2P08195 630 aaKnown RBP6.26□□□□□ -1.41
CD46-211ENST00000464082 PDHBP11177 359 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 FCER1AP12319 257 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 CAPN2P17655 700 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 CHMLP26374 656 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 STAT2P52630 851 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 OAZ1P54368 228 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 SNAP25P60880 206 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 PTH1RQ03431 593 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 RRP12Q5JTH9 1297 aaKnown RBP6.26□□□□□ -1.41
CD46-211ENST00000464082 ANO1Q5XXA6 986 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 EEF1DP3Q658K8 133 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 MAMDC4Q6UXC1 1216 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 BTNL9Q6UXG8 535 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 NECAB2Q7Z6G3 386 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 DPP9Q86TI2 863 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 CCAR1Q8IX12 1150 aaKnown RBP6.26□□□□□ -1.41
CD46-211ENST00000464082 CPXCR1Q8N123 301 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 USP33Q8TEY7 942 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 MBD6Q96DN6 1003 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 RANBP17Q9H2T7 1088 aaKnown RBP6.26□□□□□ -1.41
CD46-211ENST00000464082 STX8Q9UNK0 236 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 DIS3Q9Y2L1 958 aaKnown RBP6.26□□□□□ -1.41
CD46-211ENST00000464082 TANC1Q9C0D5 1861 aa6.26□□□□□ -1.41
CD46-211ENST00000464082 KAT6AQ92794 2004 aa6.25□□□□□ -1.41
CD46-211ENST00000464082 PATE3B3GLJ2 98 aa6.25□□□□□ -1.41
CD46-211ENST00000464082 B4E1Z4 1266 aa6.25□□□□□ -1.41
CD46-211ENST00000464082 NPIPB8E9PQR5 432 aa6.25□□□□□ -1.41
CD46-211ENST00000464082 STXBP3O00186 592 aa6.25□□□□□ -1.41
CD46-211ENST00000464082 AURKAO14965 403 aa6.25□□□□□ -1.41
CD46-211ENST00000464082 SGSM2O43147 1006 aa6.25□□□□□ -1.41
CD46-211ENST00000464082 SEPT4O43236 478 aa6.25□□□□□ -1.41
CD46-211ENST00000464082 SNAI1O95863 264 aaPredicted RBP6.25□□□□□ -1.41
CD46-211ENST00000464082 TOP1P11387 765 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms