RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 GRM5P41594 1212 aa18.99■□□□□ 0.63
HMGN1-210ENST00000464078 SOX4Q06945 474 aaPredicted RBP18.99■□□□□ 0.63
HMGN1-210ENST00000464078 FZD5Q13467 585 aa18.99■□□□□ 0.63
HMGN1-210ENST00000464078 PRSS36Q5K4E3 855 aa18.99■□□□□ 0.63
HMGN1-210ENST00000464078 POTEHQ6S545 545 aa18.99■□□□□ 0.63
HMGN1-210ENST00000464078 ALKAL1Q6UXT8 129 aa18.99■□□□□ 0.63
HMGN1-210ENST00000464078 TCEAL8Q8IYN2 117 aa18.99■□□□□ 0.63
HMGN1-210ENST00000464078 PLA2G2FQ9BZM2 168 aa18.99■□□□□ 0.63
HMGN1-210ENST00000464078 GOLGA2P5Q9HBQ8 144 aa18.99■□□□□ 0.63
HMGN1-210ENST00000464078 HEBP1Q9NRV9 189 aa18.99■□□□□ 0.63
HMGN1-210ENST00000464078 SMG5Q9UPR3 1016 aaKnown RBP18.99■□□□□ 0.63
HMGN1-210ENST00000464078 PHLPP2Q6ZVD8 1323 aa18.99■□□□□ 0.63
HMGN1-210ENST00000464078 CITO14578 2027 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 WDR27A2RRH5 827 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 I3L4J1 428 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 SYN3O14994 580 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 LRG1P02750 347 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 ATF2P15336 505 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 BRCC3P46736 316 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 ADCY1Q08828 1119 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 RSPO4Q2I0M5 234 aaPredicted RBP18.98■□□□□ 0.63
HMGN1-210ENST00000464078 MAMSTRQ6ZN01 415 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 ZNF687Q8N1G0 1237 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 MCRS1Q96EZ8 462 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 IER2Q9BTL4 223 aa18.98■□□□□ 0.63
HMGN1-210ENST00000464078 PDCD11Q14690 1871 aaKnown RBP18.97■□□□□ 0.63
HMGN1-210ENST00000464078 PRRG1O14668 218 aa18.97■□□□□ 0.63
HMGN1-210ENST00000464078 FOSBP53539 338 aa18.97■□□□□ 0.63
HMGN1-210ENST00000464078 YARSP54577 528 aaKnown RBP18.97■□□□□ 0.63
HMGN1-210ENST00000464078 SAFBQ15424 915 aaKnown RBP eCLIP18.97■□□□□ 0.63
HMGN1-210ENST00000464078 TPGS2Q68CL5 300 aa18.97■□□□□ 0.63
HMGN1-210ENST00000464078 TANGO2Q6ICL3 276 aa18.97■□□□□ 0.63
HMGN1-210ENST00000464078 CEP120Q8N960 986 aa18.97■□□□□ 0.63
HMGN1-210ENST00000464078 SECISBP2LQ93073 1101 aaKnown RBP18.97■□□□□ 0.63
HMGN1-210ENST00000464078 CCDC94Q9BW85 323 aaPredicted RBP18.97■□□□□ 0.63
HMGN1-210ENST00000464078 CDT1Q9H211 546 aa18.97■□□□□ 0.63
HMGN1-210ENST00000464078 BHMT2Q9H2M3 363 aa18.97■□□□□ 0.63
HMGN1-210ENST00000464078 PTPRHQ9HD43 1115 aa18.97■□□□□ 0.63
HMGN1-210ENST00000464078 TRPV5Q9NQA5 729 aa18.97■□□□□ 0.63
HMGN1-210ENST00000464078 INSL5Q9Y5Q6 135 aa18.97■□□□□ 0.63
HMGN1-210ENST00000464078 K7ERI5 159 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 MAN2B1O00754 1011 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 ZNF197O14709 1029 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 TDGF1P13385 188 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 KCNE1P15382 129 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 ELF1P32519 619 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 FXR2P51116 673 aaKnown RBP eCLIP18.96■□□□□ 0.63
HMGN1-210ENST00000464078 LMNB2Q03252 620 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 ST3GAL1Q11201 340 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 MTAPQ13126 283 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 MRPL58Q14197 206 aaKnown RBP18.96■□□□□ 0.63
HMGN1-210ENST00000464078 ZNF568Q3ZCX4 644 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 ASB16Q96NS5 453 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 ACO2Q99798 780 aaKnown RBP18.96■□□□□ 0.63
HMGN1-210ENST00000464078 CHRDQ9H2X0 955 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 MAFFQ9ULX9 164 aa18.96■□□□□ 0.63
HMGN1-210ENST00000464078 PRR5-ARHGAP8B1AHC4 643 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 H7C4K7 107 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 PODXLO00592 558 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 RPL9P32969 192 aaKnown RBP18.95■□□□□ 0.62
HMGN1-210ENST00000464078 ARHGAP8P85298 464 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 ECM1Q16610 540 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 FAM78AQ5JUQ0 283 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 IRF7Q92985 503 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 ZMAT2Q96NC0 199 aaKnown RBP18.95■□□□□ 0.62
HMGN1-210ENST00000464078 CORO1BQ9BR76 489 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 MRPL4Q9BYD3 311 aaKnown RBP18.95■□□□□ 0.62
HMGN1-210ENST00000464078 FOXP1Q9H334 677 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-210ENST00000464078 TMEM134Q9H6X4 195 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 BRD9Q9H8M2 597 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 ZFP14Q9HCL3 533 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 CNTN3Q9P232 1028 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 ARHGAP28Q9P2N2 729 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 TICRRQ7Z2Z1 1910 aa18.95■□□□□ 0.62
HMGN1-210ENST00000464078 ABLIM1O14639 778 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 MCF2P10911 925 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 PROZP22891 400 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 CCT6AP40227 531 aaKnown RBP18.94■□□□□ 0.62
HMGN1-210ENST00000464078 CCR2P41597 374 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 NPTX2P47972 431 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 TRAPPC10P48553 1259 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 EPHA5P54756 1037 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 TAS1R3Q7RTX0 852 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 MAP4K3Q8IVH8 894 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 LEMD2Q8NC56 503 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 SMARCD2Q92925 531 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 TCEAL4Q96EI5 215 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 TRMT61BQ9BVS5 477 aaKnown RBP18.94■□□□□ 0.62
HMGN1-210ENST00000464078 TRPV4Q9HBA0 871 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 CYP4F11Q9HBI6 524 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 FBXL5Q9UKA1 691 aa18.94■□□□□ 0.62
HMGN1-210ENST00000464078 SEC24AO95486 1093 aa18.93■□□□□ 0.62
HMGN1-210ENST00000464078 TGM1P22735 817 aa18.93■□□□□ 0.62
HMGN1-210ENST00000464078 DMP1Q13316 513 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-210ENST00000464078 GRM2Q14416 872 aa18.93■□□□□ 0.62
HMGN1-210ENST00000464078 ZNF174Q15697 407 aa18.93■□□□□ 0.62
HMGN1-210ENST00000464078 TTC38Q5R3I4 469 aa18.93■□□□□ 0.62
HMGN1-210ENST00000464078 ZNF280DQ6N043 979 aa18.93■□□□□ 0.62
HMGN1-210ENST00000464078 TSSK4Q6SA08 328 aa18.93■□□□□ 0.62
HMGN1-210ENST00000464078 PDZD4Q76G19 769 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms