RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 DUSP9Q99956 384 aaKnown RBP20.53■□□□□ 0.88
LMNB1-204ENST00000463908 GPR62Q9BZJ7 368 aa20.53■□□□□ 0.88
LMNB1-204ENST00000463908 LMAN2LQ9H0V9 348 aa20.53■□□□□ 0.88
LMNB1-204ENST00000463908 PTPRJQ12913 1337 aa20.53■□□□□ 0.88
LMNB1-204ENST00000463908 TULP1O00294 542 aaPredicted RBP20.52■□□□□ 0.88
LMNB1-204ENST00000463908 PODXLO00592 558 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 IGFBP4P22692 258 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 LRPAP1P30533 357 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 PPP1R2P41236 205 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 NLRP12P59046 1061 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 UBE3AQ05086 875 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 STIM1Q13586 685 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 PSMD6Q15008 389 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 KLHL10Q6JEL2 608 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 ZC3H3Q8IXZ2 948 aaKnown RBP20.52■□□□□ 0.88
LMNB1-204ENST00000463908 RNF168Q8IYW5 571 aaPredicted RBP20.52■□□□□ 0.88
LMNB1-204ENST00000463908 HASPINQ8TF76 798 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 NELFBQ8WX92 580 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 MRPL38Q96DV4 380 aaKnown RBP20.52■□□□□ 0.88
LMNB1-204ENST00000463908 GAS2L1Q99501 681 aaPredicted RBP20.52■□□□□ 0.88
LMNB1-204ENST00000463908 LMCD1Q9NZU5 365 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 ADAM28Q9UKQ2 775 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 PCDHGC5Q9Y5F6 944 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 CITO14578 2027 aa20.52■□□□□ 0.88
LMNB1-204ENST00000463908 PSMA7O14818 248 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 PPEF2O14830 753 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 FSCN2O14926 492 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 TADA2AO75478 443 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 B3GAT3O94766 335 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 RPL13P26373 211 aaKnown RBP20.51■□□□□ 0.87
LMNB1-204ENST00000463908 CCDC183Q5T5S1 534 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 CEP135Q66GS9 1140 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 LMBRD2Q68DH5 695 aaPredicted RBP20.51■□□□□ 0.87
LMNB1-204ENST00000463908 TTI2Q6NXR4 508 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 NT5DC4Q86YG4 428 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 VPS52Q8N1B4 723 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 MLKLQ8NB16 471 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 OR5B17Q8NGF7 314 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 CXorf38Q8TB03 319 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 ZNF516Q92618 1163 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 CCDC127Q96BQ5 260 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 INTS13Q9NVM9 706 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 DPP3Q9NY33 737 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 PUF60Q9UHX1 559 aaKnown RBP20.51■□□□□ 0.87
LMNB1-204ENST00000463908 ANK1P16157 1881 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 PLXNA4Q9HCM2 1894 aa20.51■□□□□ 0.87
LMNB1-204ENST00000463908 ANO9A1A5B4 782 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 TMEM189-UBE2V1I3L0A0 370 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 PIRO00625 290 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 STX17P56962 302 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 MCCD1P59942 119 aaPredicted RBP20.5■□□□□ 0.87
LMNB1-204ENST00000463908 TFAMQ00059 246 aaKnown RBP20.5■□□□□ 0.87
LMNB1-204ENST00000463908 LRRC63Q05C16 580 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 SURF1Q15526 300 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 DPCR1Q3MIW9 517 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 C9orf57Q5W0N0 161 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 FUT10Q6P4F1 479 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 BEST2Q8NFU1 509 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 PARD3BQ8TEW8 1205 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 BORCS6Q96GS4 357 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 TSG101Q99816 390 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 CTNND2Q9UQB3 1225 aa20.5■□□□□ 0.87
LMNB1-204ENST00000463908 MUC3AQ02505 3323 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 COL4A4P53420 1690 aaPredicted RBP20.49■□□□□ 0.87
LMNB1-204ENST00000463908 MAPK13O15264 365 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 XPOTO43592 962 aaKnown RBP20.49■□□□□ 0.87
LMNB1-204ENST00000463908 CSPG5O95196 566 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 FOSL2P15408 326 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 BRCC3P46736 316 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 DLG4P78352 724 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 CLDN10P78369 228 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 FKBP3Q00688 224 aaKnown RBP20.49■□□□□ 0.87
LMNB1-204ENST00000463908 PTPROQ16827 1216 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 KLHL40Q2TBA0 621 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 C1orf220Q5T0J3 134 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 FOXR2Q6PJQ5 311 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 CACTINQ8WUQ7 758 aaKnown RBP20.49■□□□□ 0.87
LMNB1-204ENST00000463908 B3GALT6Q96L58 329 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 ZBP1Q9H171 429 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 TLR9Q9NR96 1032 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 CHST7Q9NS84 486 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 FRMD4BQ9Y2L6 1034 aa20.49■□□□□ 0.87
LMNB1-204ENST00000463908 PDCD11Q14690 1871 aaKnown RBP20.49■□□□□ 0.87
LMNB1-204ENST00000463908 TRANK1O15050 2925 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 I3L4J1 428 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 CETN3O15182 167 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 LILRB3O75022 631 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 SOD2P04179 222 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 DLATP10515 647 aaKnown RBP20.48■□□□□ 0.87
LMNB1-204ENST00000463908 PSMC2P35998 433 aaKnown RBP20.48■□□□□ 0.87
LMNB1-204ENST00000463908 PAK1Q13153 545 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 KIAA0319Q5VV43 1072 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 CAVIN1Q6NZI2 390 aaKnown RBP20.48■□□□□ 0.87
LMNB1-204ENST00000463908 WDR49Q8IV35 697 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 C1orf127Q8N9H9 656 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 MICAL1Q8TDZ2 1067 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 AUTS2Q8WXX7 1259 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 CGRRF1Q99675 332 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 TCF25Q9BQ70 676 aa20.48■□□□□ 0.87
LMNB1-204ENST00000463908 SIX4Q9UIU6 781 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms