RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 IPO9Q96P70 1041 aaKnown RBP4.38□□□□□ -1.71
SCFD1-204ENST00000463622 CDX2Q99626 313 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-204ENST00000463622 KRTAP3-1Q9BYR8 98 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.38□□□□□ -1.71
SCFD1-204ENST00000463622 CCDC113Q9H0I3 377 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 C11orf49Q9H6J7 331 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 DCTPP1Q9H773 170 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 IL1RAPL2Q9NP60 686 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 RIC8BQ9NVN3 520 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 CBLCQ9ULV8 474 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 A0A1B0GUL6 1792 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 NPEPPSL1A6NEC2 478 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 AMY2AP04746 511 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 ENO2P09104 434 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-204ENST00000463622 PDE6AP16499 860 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 AMY2BP19961 511 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 CACNB3P54284 484 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 EPHA5P54756 1037 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 JAM2P57087 298 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 PPP2CBP62714 309 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 PPP2CAP67775 309 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 IFIT5Q13325 482 aaKnown RBP4.37□□□□□ -1.71
SCFD1-204ENST00000463622 ICAM4Q14773 271 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 SMAD2Q15796 467 aaKnown RBP4.37□□□□□ -1.71
SCFD1-204ENST00000463622 MAP3K21Q5TCX8 1036 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 VGLL2Q8N8G2 317 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 CHST13Q8NET6 341 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 FAM151AQ8WW52 585 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 ZNF669Q96BR6 464 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-204ENST00000463622 BARX1Q9HBU1 254 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-204ENST00000463622 NOP58Q9Y2X3 529 aaKnown RBP4.37□□□□□ -1.71
SCFD1-204ENST00000463622 AFG3L2Q9Y4W6 797 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 PFASO15067 1338 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 SALL3Q9BXA9 1300 aa4.37□□□□□ -1.71
SCFD1-204ENST00000463622 MYH3P11055 1940 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 ZNF839A8K0R7 811 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 AQP7O14520 342 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 TNPO2O14787 897 aaKnown RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 GPR42O15529 346 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 SURF6O75683 361 aaKnown RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 CRTAMO95727 393 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 KNG1P01042 644 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 ADORA1P30542 326 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 GYG1P46976 350 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 DNM2P50570 870 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 SUMO1P63165 101 aaKnown RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 TFCP2Q12800 502 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 ARHGEF18Q6ZSZ5 1173 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 KLHL36Q8N4N3 616 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 TBC1D22AQ8WUA7 517 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 FBXW5Q969U6 566 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 TEKT1Q969V4 418 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 EAF2Q96CJ1 260 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 DHRS4Q9BTZ2 278 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 KCND1Q9NSA2 647 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 SIRPGQ9P1W8 387 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 CNOT11Q9UKZ1 510 aaKnown RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 COL2A1P02458 1487 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 MUC3AQ02505 3323 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 RPAP1Q9BWH6 1393 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 EYA2O00167 538 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 MAN2B1O00754 1011 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 HMGCRP04035 888 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 CHGBP05060 677 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 ZNF20P17024 532 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 PTPN1P18031 435 aaKnown RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 PLA2G5P39877 138 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 ANKRD45Q5TZF3 282 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 PKN3Q6P5Z2 889 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 LDHAL6AQ6ZMR3 332 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 Q6ZUG5 572 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 DPH6Q7L8W6 267 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 MAMDC2Q7Z304 686 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 MAFAQ8NHW3 353 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 COA7Q96BR5 231 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 SAMD11Q96NU1 681 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 DEPDC7Q96QD5 511 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 DNAJC7Q99615 494 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 CCDC8Q9H0W5 538 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 SNTG2Q9NY99 539 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 NDOR1Q9UHB4 597 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 ADAM29Q9UKF5 820 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 SRPK3Q9UPE1 567 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 MRPS23Q9Y3D9 190 aaKnown RBP4.36□□□□□ -1.71
SCFD1-204ENST00000463622 NUB1Q9Y5A7 615 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 ZHX2Q9Y6X8 837 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 EYSQ5T1H1 3165 aa4.36□□□□□ -1.71
SCFD1-204ENST00000463622 ZNF888P0CJ79 500 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-204ENST00000463622 FGFR2P21802 821 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 NUCB1Q02818 461 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 DBPQ10586 325 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-204ENST00000463622 SERINC3Q13530 473 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 GPR19Q15760 415 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 FAM110CQ1W6H9 321 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 LRRC26Q2I0M4 334 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 CPZQ66K79 652 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 CDC42EP5Q6NZY7 148 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 ZNF585AQ6P3V2 769 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 CENPQQ7L2Z9 268 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-204ENST00000463622 CHD1LQ86WJ1 897 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms