RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 RAB34Q9BZG1 259 aa21.69■■□□□ 1.06
VARS-221ENST00000463184 CDT1Q9H211 546 aa21.69■■□□□ 1.06
VARS-221ENST00000463184 NOL7Q9UMY1 257 aaKnown RBP21.69■■□□□ 1.06
VARS-221ENST00000463184 TRIP11Q15643 1979 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 PODXLO00592 558 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 SYN3O14994 580 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 ATF2P15336 505 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 NPTX2P47972 431 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 PEX3P56589 373 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 OSTNP61366 133 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 DMP1Q13316 513 aaPredicted RBP21.68■■□□□ 1.06
VARS-221ENST00000463184 SLC5A9Q2M3M2 681 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 ZNF568Q3ZCX4 644 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 VARS2Q5ST30 1063 aaKnown RBP21.68■■□□□ 1.06
VARS-221ENST00000463184 CCDC83Q8IWF9 413 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 CEP120Q8N960 986 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 SUMF1Q8NBK3 374 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 ELSPBP1Q96BH3 223 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 ACAP3Q96P50 834 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 DNM3Q9UQ16 869 aa21.68■■□□□ 1.06
VARS-221ENST00000463184 RBM19Q9Y4C8 960 aaKnown RBP21.68■■□□□ 1.06
VARS-221ENST00000463184 DMXL1Q9Y485 3027 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 WDR27A2RRH5 827 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 H7C4K7 107 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 PRRG1O14668 218 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 SPTLC1O15269 473 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 TBC1D4O60343 1298 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 KCNE1P15382 129 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 CD72P21854 359 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 RPL9P32969 192 aaKnown RBP21.67■■□□□ 1.06
VARS-221ENST00000463184 HMGN5P82970 282 aaKnown RBP21.67■■□□□ 1.06
VARS-221ENST00000463184 TCEAL8Q8IYN2 117 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 IGSF22Q8N9C0 903 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 SNX29Q8TEQ0 813 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 CLDN23Q96B33 292 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 PLA2G2FQ9BZM2 168 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 ARHGAP28Q9P2N2 729 aa21.67■■□□□ 1.06
VARS-221ENST00000463184 MRPS17Q9Y2R5 130 aaKnown RBP21.67■■□□□ 1.06
VARS-221ENST00000463184 FRYLO94915 3013 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 ZNF197O14709 1029 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 HIP1RO75146 1068 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 MICAL2O94851 1124 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 MCF2P10911 925 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 RPS9P46781 194 aaKnown RBP21.66■■□□□ 1.06
VARS-221ENST00000463184 CSTF1Q05048 431 aaKnown RBP21.66■■□□□ 1.06
VARS-221ENST00000463184 MRPL58Q14197 206 aaKnown RBP21.66■■□□□ 1.06
VARS-221ENST00000463184 PUM1Q14671 1186 aaKnown RBP eCLIP21.66■■□□□ 1.06
VARS-221ENST00000463184 TPGS2Q68CL5 300 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 TANGO2Q6ICL3 276 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 ZNF852Q6ZMS4 543 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 TPRG1Q6ZUI0 275 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 DGLUCYQ7Z3D6 616 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 DRC1Q96MC2 740 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 ZMAT2Q96NC0 199 aaKnown RBP21.66■■□□□ 1.06
VARS-221ENST00000463184 TCHPQ9BT92 498 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 TARS2Q9BW92 718 aaKnown RBP21.66■■□□□ 1.06
VARS-221ENST00000463184 C17orf75Q9HAS0 396 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 KMT5AQ9NQR1 393 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 CNTN3Q9P232 1028 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 NUB1Q9Y5A7 615 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 PCDHGA2Q9Y5H1 932 aa21.66■■□□□ 1.06
VARS-221ENST00000463184 OTOGLQ3ZCN5 2332 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 CEBPBP17676 345 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 PROZP22891 400 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 PTGDRQ13258 359 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 PRSS36Q5K4E3 855 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 POTEHQ6S545 545 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 TAS1R3Q7RTX0 852 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 DAW1Q8N136 415 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 DCLK2Q8N568 766 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 FAM184AQ8NB25 1140 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 ATRIPQ8WXE1 791 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 DNASE1L2Q92874 299 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 CORO1BQ9BR76 489 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 CYP4F11Q9HBI6 524 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 MAFFQ9ULX9 164 aa21.65■■□□□ 1.06
VARS-221ENST00000463184 COL4A3Q01955 1670 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 E9PMD0 336 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 TARSP26639 723 aaKnown RBP21.64■■□□□ 1.05
VARS-221ENST00000463184 ARPP19P56211 112 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 NBR1Q14596 966 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 KRT79Q5XKE5 535 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 RINT1Q6NUQ1 792 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 MPZL3Q6UWV2 235 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 ZSCAN31Q96LW9 406 aaPredicted RBP21.64■■□□□ 1.05
VARS-221ENST00000463184 TIPINQ9BVW5 301 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 ZFP14Q9HCL3 533 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 HEBP1Q9NRV9 189 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 ZSCAN32Q9NX65 697 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 KCNG1Q9UIX4 513 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 FBXL5Q9UKA1 691 aa21.64■■□□□ 1.05
VARS-221ENST00000463184 LAD1O00515 517 aa21.63■■□□□ 1.05
VARS-221ENST00000463184 ABLIM1O14639 778 aa21.63■■□□□ 1.05
VARS-221ENST00000463184 U2AF2P26368 475 aaKnown RBP eCLIP21.63■■□□□ 1.05
VARS-221ENST00000463184 ADCY1Q08828 1119 aa21.63■■□□□ 1.05
VARS-221ENST00000463184 CTXN3Q4LDR2 81 aa21.63■■□□□ 1.05
VARS-221ENST00000463184 CYP4A22Q5TCH4 519 aa21.63■■□□□ 1.05
VARS-221ENST00000463184 C1orf186Q6ZWK4 172 aa21.63■■□□□ 1.05
VARS-221ENST00000463184 PDZD4Q76G19 769 aaPredicted RBP21.63■■□□□ 1.05
VARS-221ENST00000463184 ELMOD1Q8N336 334 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms