RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SIK3Q9Y2K2 1263 aa11.52□□□□□ -0.57
RTF1-202ENST00000462276 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.51□□□□□ -0.57
RTF1-202ENST00000462276 MEFVO15553 781 aaPredicted RBP11.51□□□□□ -0.57
RTF1-202ENST00000462276 NFICP08651 508 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 FAM163BP0C2L3 166 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 P4HA1P13674 534 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 TRIM21P19474 475 aaKnown RBP11.51□□□□□ -0.57
RTF1-202ENST00000462276 PON1P27169 355 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 LRPAP1P30533 357 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 KCNJ6P48051 423 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 MYO1EQ12965 1108 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 EPC2Q52LR7 807 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 PRPF38BQ5VTL8 546 aaKnown RBP11.51□□□□□ -0.57
RTF1-202ENST00000462276 TDRD10Q5VZ19 366 aaKnown RBP11.51□□□□□ -0.57
RTF1-202ENST00000462276 PPFIBP1Q86W92 1011 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 DRC7Q8IY82 874 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 EFCAB13Q8IY85 973 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 TTC39CQ8N584 583 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 RNF169Q8NCN4 708 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 GSTCDQ8NEC7 633 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 ZNF397Q8NF99 534 aaPredicted RBP11.51□□□□□ -0.57
RTF1-202ENST00000462276 NEK11Q8NG66 645 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 OR5B17Q8NGF7 314 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 PHOSPHO2Q8TCD6 241 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 BADQ92934 168 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 TOP1MTQ969P6 601 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 VWCEQ96DN2 955 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 PCMTD1Q96MG8 357 aaPredicted RBP11.51□□□□□ -0.57
RTF1-202ENST00000462276 PPP1R10Q96QC0 940 aaKnown RBP11.51□□□□□ -0.57
RTF1-202ENST00000462276 MTMR12Q9C0I1 747 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 MMRN2Q9H8L6 949 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 KLK14Q9P0G3 267 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 GCNT4Q9P109 453 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 MYO6Q9UM54 1294 aa11.51□□□□□ -0.57
RTF1-202ENST00000462276 A0A1W2PQJ5 194 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 ANO9A1A5B4 782 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
RTF1-202ENST00000462276 ASS1P00966 412 aaKnown RBP11.5□□□□□ -0.57
RTF1-202ENST00000462276 HLA-DRAP01903 254 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 TBXAS1P24557 533 aaPredicted RBP11.5□□□□□ -0.57
RTF1-202ENST00000462276 MLH1P40692 756 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 PIK3CAP42336 1068 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 WNT7BP56706 349 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 GSDMDP57764 484 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 CCDC173Q0VFZ6 552 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 KCNMA1Q12791 1236 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 TRIM65Q6PJ69 517 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 C1orf127Q8N9H9 656 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 LMO3Q8TAP4 145 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 TAS1R2Q8TE23 839 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 HERVK_113Q902F9 699 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 PDLIM2Q96JY6 352 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 ZMAT2Q96NC0 199 aaKnown RBP11.5□□□□□ -0.57
RTF1-202ENST00000462276 NT5C1BQ96P26 610 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 CRACR2AQ9BSW2 395 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 INTS2Q9H0H0 1204 aaKnown RBP11.5□□□□□ -0.57
RTF1-202ENST00000462276 APEX2Q9UBZ4 518 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 SIP14410 1827 aa11.5□□□□□ -0.57
RTF1-202ENST00000462276 ARHGEF37A1IGU5 675 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 PIRO00625 290 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 PTGESO14684 152 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 CCDC172P0C7W6 258 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 UCHL3P15374 230 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 MFAP3P55082 362 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 GCNT1Q02742 428 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 TUSC3Q13454 348 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 TSR1Q2NL82 804 aaKnown RBP11.49□□□□□ -0.57
RTF1-202ENST00000462276 KLHDC7AQ5VTJ3 777 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 ZNF365Q70YC5 407 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 CNGA4Q8IV77 575 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 LPPQ93052 612 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 ZFP42Q96MM3 310 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 ZNF560Q96MR9 790 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 FAM193BQ96PV7 902 aaPredicted RBP11.49□□□□□ -0.57
RTF1-202ENST00000462276 DNAI2Q9GZS0 605 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 CYP3A43Q9HB55 503 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 CEP72Q9P209 647 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 CAPN11Q9UMQ6 739 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 LUC7L2Q9Y383 392 aaKnown RBP11.49□□□□□ -0.57
RTF1-202ENST00000462276 PTPRJQ12913 1337 aa11.49□□□□□ -0.57
RTF1-202ENST00000462276 DGKIO75912 1065 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 VNN1O95497 513 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 CST3P01034 146 aaPredicted RBP11.48□□□□□ -0.57
RTF1-202ENST00000462276 ITGB3P05106 788 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 KRT19P08727 400 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 SLC9A1P19634 815 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 SCNN1GP51170 649 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 WDR5P61964 334 aaKnown RBP11.48□□□□□ -0.57
RTF1-202ENST00000462276 YWHAEP62258 255 aaKnown RBP11.48□□□□□ -0.57
RTF1-202ENST00000462276 ZBED6P86452 979 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 RNASELQ05823 741 aaKnown RBP11.48□□□□□ -0.57
RTF1-202ENST00000462276 DSC1Q08554 894 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 TBX2Q13207 712 aaPredicted RBP11.48□□□□□ -0.57
RTF1-202ENST00000462276 TCTN1Q2MV58 587 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 CLLU1OSQ5K130 101 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 TMEM240Q5SV17 173 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 C9orf57Q5W0N0 161 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 LMBRD2Q68DH5 695 aaPredicted RBP11.48□□□□□ -0.57
RTF1-202ENST00000462276 DCLRE1AQ6PJP8 1040 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms