RNA–Protein interactions for RNA: ENST00000461944.1

NGEF-208, Transcript of neuronal guanine nucleotide exchange factor, humanhuman

TSL 4

Gene NGEF, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGEF-208ENST00000461944 HLA-DRAP01903 254 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 C4BPAP04003 597 aaKnown RBP19.85■□□□□ 0.77
NGEF-208ENST00000461944 ITGB3P05106 788 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 TRIM21P19474 475 aaKnown RBP19.85■□□□□ 0.77
NGEF-208ENST00000461944 GUCY2FP51841 1108 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 FAM189BP81408 668 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 GRIK3Q13003 919 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 NCOA4Q13772 614 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 EPC2Q52LR7 807 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 ALKAL1Q6UXT8 129 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.85■□□□□ 0.77
NGEF-208ENST00000461944 C15orf39Q6ZRI6 1047 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 SPC24Q8NBT2 197 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 NEK11Q8NG66 645 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 C18orf25Q96B23 403 aaPredicted RBP19.85■□□□□ 0.77
NGEF-208ENST00000461944 VWCEQ96DN2 955 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 DPP3Q9NY33 737 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 ITGA11Q9UKX5 1188 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 NR2E3Q9Y5X4 410 aa19.85■□□□□ 0.77
NGEF-208ENST00000461944 FNDC1Q4ZHG4 1894 aaPredicted RBP19.84■□□□□ 0.77
NGEF-208ENST00000461944 PMM2O15305 246 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 UPP2O95045 317 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 POMCP01189 267 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 THP07101 528 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 TPM1P09493 284 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 POLR2BP30876 1174 aaKnown RBP19.84■□□□□ 0.77
NGEF-208ENST00000461944 PBX1P40424 430 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 WDR5P61964 334 aaKnown RBP19.84■□□□□ 0.77
NGEF-208ENST00000461944 XKR4Q5GH76 650 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 CLLU1OSQ5K130 101 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 TRIM65Q6PJ69 517 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 OTOP2Q7RTS6 562 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 C1orf127Q8N9H9 656 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.84■□□□□ 0.77
NGEF-208ENST00000461944 RAB20Q9NX57 234 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 SIK3Q9Y2K2 1263 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.84■□□□□ 0.77
NGEF-208ENST00000461944 TTC3P53804 2025 aa19.84■□□□□ 0.77
NGEF-208ENST00000461944 SLC9A1P19634 815 aa19.83■□□□□ 0.77
NGEF-208ENST00000461944 PON1P27169 355 aa19.83■□□□□ 0.77
NGEF-208ENST00000461944 TRIM14Q14142 442 aa19.83■□□□□ 0.77
NGEF-208ENST00000461944 ZNF699Q32M78 642 aa19.83■□□□□ 0.77
NGEF-208ENST00000461944 NOMO2Q5JPE7 1267 aa19.83■□□□□ 0.77
NGEF-208ENST00000461944 WDR44Q5JSH3 913 aa19.83■□□□□ 0.77
NGEF-208ENST00000461944 PPP1R10Q96QC0 940 aaKnown RBP19.83■□□□□ 0.77
NGEF-208ENST00000461944 PLAGL2Q9UPG8 496 aa19.83■□□□□ 0.77
NGEF-208ENST00000461944 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.83■□□□□ 0.77
NGEF-208ENST00000461944 OFD1O75665 1012 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 VNN1O95497 513 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 FGBP02675 491 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 CYP3A5P20815 502 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 DEFB103AP81534 67 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 RNASELQ05823 741 aaKnown RBP19.82■□□□□ 0.76
NGEF-208ENST00000461944 CCDC173Q0VFZ6 552 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 KCNMA1Q12791 1236 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 LRMPQ12912 555 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 PPFIBP1Q86W92 1011 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 SEMA4DQ92854 862 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 ZNF560Q96MR9 790 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 NT5C1BQ96P26 610 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 MRPL9Q9BYD2 267 aaKnown RBP19.82■□□□□ 0.76
NGEF-208ENST00000461944 GOLGA2P5Q9HBQ8 144 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 APEX2Q9UBZ4 518 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 COQ4Q9Y3A0 265 aa19.82■□□□□ 0.76
NGEF-208ENST00000461944 TBKBP1A7MCY6 615 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 INPPL1O15357 1258 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 GATMP50440 423 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 AFF1P51825 1210 aaKnown RBP19.81■□□□□ 0.76
NGEF-208ENST00000461944 NOP14P78316 857 aaKnown RBP19.81■□□□□ 0.76
NGEF-208ENST00000461944 RBP5P82980 135 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 ZNF365Q70YC5 407 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 CACNA2D4Q7Z3S7 1137 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 TMEM130Q8N3G9 435 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 EHBP1Q8NDI1 1231 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 GSTCDQ8NEC7 633 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 IQCDQ96DY2 449 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 FAM193BQ96PV7 902 aaPredicted RBP19.81■□□□□ 0.76
NGEF-208ENST00000461944 PI4K2AQ9BTU6 479 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 NUP58Q9BVL2 599 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 MTIF3Q9H2K0 278 aaKnown RBP19.81■□□□□ 0.76
NGEF-208ENST00000461944 SIX4Q9UIU6 781 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 AGAP1Q9UPQ3 857 aa19.81■□□□□ 0.76
NGEF-208ENST00000461944 CASTOR2A6NHX0 329 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 ZC3H11AO75152 810 aaKnown RBP eCLIP19.8■□□□□ 0.76
NGEF-208ENST00000461944 PTMAP06454 111 aaKnown RBP19.8■□□□□ 0.76
NGEF-208ENST00000461944 RFX1P22670 979 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 EPHB4P54760 987 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 MYL6P60660 151 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 APBA1Q02410 837 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 SOX4Q06945 474 aaPredicted RBP19.8■□□□□ 0.76
NGEF-208ENST00000461944 MYO1EQ12965 1108 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 ZBTB6Q15916 424 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 PAN2Q504Q3 1202 aaKnown RBP19.8■□□□□ 0.76
NGEF-208ENST00000461944 FAM117BQ6P1L5 589 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 LRRC43Q8N309 656 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 PPM1KQ8N3J5 372 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 RSPH1Q8WYR4 309 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.8■□□□□ 0.762e-6■■□□□ 12.2
NGEF-208ENST00000461944 PLCB1Q9NQ66 1216 aa19.8■□□□□ 0.76
NGEF-208ENST00000461944 TBC1D13Q9NVG8 400 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms