RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PDGFBP01127 241 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-207ENST00000461798 PIGRP01833 764 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 ADRB2P07550 413 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 CLTAP09496 248 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 LAMP2P13473 410 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 OR1D2P34982 312 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 DDIT3P35638 169 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 PTPN5P54829 565 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 VCPP55072 806 aaKnown RBP10.01□□□□□ -0.81
BRCA1-207ENST00000461798 OSTNP61366 133 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 GRIN1Q05586 938 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 MRPL58Q14197 206 aaKnown RBP10.01□□□□□ -0.81
BRCA1-207ENST00000461798 NOLC1Q14978 699 aaKnown RBP eCLIP10.01□□□□□ -0.81
BRCA1-207ENST00000461798 PTPAQ15257 358 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 ZBTB6Q15916 424 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 KYAT1Q16773 422 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 SLC8B1Q6J4K2 584 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 RSPO2Q6UXX9 243 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-207ENST00000461798 ANKS3Q6ZW76 656 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 GLYCTKQ8IVS8 523 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 C3orf58Q8NDZ4 430 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 PRSS33Q8NF86 280 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 RAD54LQ92698 747 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 MYADMQ96S97 322 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 TSPAN18Q96SJ8 248 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 REEP2Q9BRK0 252 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 BACH2Q9BYV9 841 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 SMOC2Q9H3U7 446 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 PIDD1Q9HB75 910 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 GOLGA2P5Q9HBQ8 144 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 DUSP12Q9UNI6 340 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 MYO10Q9HD67 2058 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 TTC26A0AVF1 554 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 PODXLO00592 558 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 ABLIM3O94929 683 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 C8AP07357 584 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 MYBP10242 640 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 PLCG1P19174 1290 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 CYP3A5P20815 502 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 SYT1P21579 422 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 TKTP29401 623 aaKnown RBP10□□□□□ -0.81
BRCA1-207ENST00000461798 GBP2P32456 591 aaPredicted RBP10□□□□□ -0.81
BRCA1-207ENST00000461798 ABCD1P33897 745 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 BRCC3P46736 316 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 CLCN5P51795 746 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 GTF2BQ00403 316 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 TCF15Q12870 199 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 LIN9Q5TKA1 542 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 GPBP1Q86WP2 473 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 SLC44A3Q8N4M1 653 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 ZNF461Q8TAF7 563 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 FIZ1Q96SL8 496 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 HAPLN2Q9GZV7 340 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 IRF2BPLQ9H1B7 796 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 ST6GALNAC4Q9H4F1 302 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 PARVGQ9HBI0 331 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 WNT16Q9UBV4 365 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 TBX20Q9UMR3 447 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 SRPRBQ9Y5M8 271 aaKnown RBP10□□□□□ -0.81
BRCA1-207ENST00000461798 CACNA1HO95180 2353 aa10□□□□□ -0.81
BRCA1-207ENST00000461798 ARHGEF37A1IGU5 675 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 H7C4K7 107 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 I3L4J1 428 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 TRAK2O60296 914 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 FAM189A1O60320 539 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 XYLBO75191 536 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 FAM13AO94988 1023 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 NPR3P17342 541 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 FSHRP23945 695 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 LRPAP1P30533 357 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 RESTQ13127 1097 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 MCM6Q14566 821 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 KARSQ15046 597 aaKnown RBP9.99□□□□□ -0.81
BRCA1-207ENST00000461798 PPM1LQ5SGD2 360 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 AXDND1Q5T1B0 1012 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-207ENST00000461798 USP49Q70CQ1 688 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 GRASPQ7Z6J2 395 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-207ENST00000461798 MYCT1Q8N699 235 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 LARP4BQ92615 738 aaKnown RBP9.99□□□□□ -0.81
BRCA1-207ENST00000461798 C18orf25Q96B23 403 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-207ENST00000461798 SUSD3Q96L08 255 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 AVENQ9NQS1 362 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-207ENST00000461798 ANKFY1Q9P2R3 1169 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 FBXO2Q9UK22 296 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-207ENST00000461798 KCNH3Q9ULD8 1083 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 MAFFQ9ULX9 164 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 CLIC4Q9Y696 253 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 CDY1Q9Y6F8 540 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 DENND4AQ7Z401 1863 aa9.99□□□□□ -0.81
BRCA1-207ENST00000461798 A0A0B4J269 797 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 VPS37CA5D8V6 355 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-207ENST00000461798 OGTO15294 1046 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 HARSP12081 509 aaKnown RBP9.98□□□□□ -0.81
BRCA1-207ENST00000461798 PAX3P23760 479 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 AARSP49588 968 aaKnown RBP eCLIP9.98□□□□□ -0.81
BRCA1-207ENST00000461798 LIG4P49917 911 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 POU5F1Q01860 360 aaKnown RBP9.98□□□□□ -0.81
BRCA1-207ENST00000461798 ROR1Q01973 937 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 HTR4Q13639 388 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 DHX8Q14562 1220 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms