RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 PXYLP1Q8TE99 480 aa7.3□□□□□ -1.24
MSH2-204ENST00000461394 PTCD2Q8WV60 388 aaKnown RBP7.3□□□□□ -1.24
MSH2-204ENST00000461394 DHX38Q92620 1227 aaKnown RBP7.3□□□□□ -1.24
MSH2-204ENST00000461394 KCNN1Q92952 543 aa7.3□□□□□ -1.24
MSH2-204ENST00000461394 KREMEN1Q96MU8 473 aa7.3□□□□□ -1.24
MSH2-204ENST00000461394 PSMB7Q99436 277 aa7.3□□□□□ -1.24
MSH2-204ENST00000461394 MTMR12Q9C0I1 747 aa7.3□□□□□ -1.24
MSH2-204ENST00000461394 CDT1Q9H211 546 aa7.3□□□□□ -1.24
MSH2-204ENST00000461394 FZD8Q9H461 694 aa7.3□□□□□ -1.24
MSH2-204ENST00000461394 MINDY3Q9H8M7 445 aa7.3□□□□□ -1.24
MSH2-204ENST00000461394 CTTNBP2NLQ9P2B4 639 aa7.3□□□□□ -1.24
MSH2-204ENST00000461394 CPSF3Q9UKF6 684 aaKnown RBP7.3□□□□□ -1.24
MSH2-204ENST00000461394 INTUQ9ULD6 942 aa7.3□□□□□ -1.24
MSH2-204ENST00000461394 GNEQ9Y223 722 aaKnown RBP7.3□□□□□ -1.24
MSH2-204ENST00000461394 COQ4Q9Y3A0 265 aa7.3□□□□□ -1.24
MSH2-204ENST00000461394 PTPRJQ12913 1337 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 NRCAMQ92823 1304 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 CITO14578 2027 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 POM121CA8CG34 1229 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 M0QZ92 97 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 RTN2O75298 545 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 VNN1O95497 513 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 NPTXRO95502 500 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 MMEP08473 750 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 CLTAP09496 248 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 TMEM253P0C7T8 217 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 STAG3L1P0CL83 205 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 CXCL8P10145 99 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 TCP1P17987 556 aaKnown RBP7.29□□□□□ -1.24
MSH2-204ENST00000461394 CD58P19256 250 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 YARSP54577 528 aaKnown RBP7.29□□□□□ -1.24
MSH2-204ENST00000461394 YWHAEP62258 255 aaKnown RBP7.29□□□□□ -1.24
MSH2-204ENST00000461394 CDC42EP1Q00587 391 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 GCNT1Q02742 428 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 POU5F1BQ06416 359 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 NOGQ13253 232 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 CUL2Q13617 745 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 RPS6KA1Q15418 735 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 PTPROQ16827 1216 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 FAM187BQ17R55 369 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 DEFB115Q30KQ5 88 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 ZNF699Q32M78 642 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 FAM47CQ5HY64 1035 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 PAPD7Q5XG87 772 aaKnown RBP7.29□□□□□ -1.24
MSH2-204ENST00000461394 TMEM270Q6UE05 265 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 SCARA5Q6ZMJ2 495 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 PEX26Q7Z412 305 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 DAAM2Q86T65 1068 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 NOP9Q86U38 636 aaKnown RBP7.29□□□□□ -1.24
MSH2-204ENST00000461394 SLC47A2Q86VL8 602 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 FAM71AQ8IYT1 594 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 SYCE1Q8N0S2 351 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 SLAIN1Q8ND83 568 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 SHC3Q92529 594 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 USP6NLQ92738 828 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 ZNF653Q96CK0 615 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 OSBPL9Q96SU4 736 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 ZIC5Q96T25 663 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 OSMRQ99650 979 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 CCDC94Q9BW85 323 aaPredicted RBP7.29□□□□□ -1.24
MSH2-204ENST00000461394 NFKBIZQ9BYH8 718 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 TRIM6Q9C030 488 aaPredicted RBP7.29□□□□□ -1.24
MSH2-204ENST00000461394 ARHGAP39Q9C0H5 1083 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 PDZD7Q9H5P4 517 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 IFT122Q9HBG6 1241 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 LIMD1Q9UGP4 676 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 SALL4Q9UJQ4 1053 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 AMFRQ9UKV5 643 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 SNX12Q9UMY4 172 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 GABRQQ9UN88 632 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 Q9Y3F1 56 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 RALGAPA2Q2PPJ7 1873 aa7.29□□□□□ -1.24
MSH2-204ENST00000461394 NCANO14594 1321 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 ATP8B3O60423 1300 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 TRIP12Q14669 1992 aaPredicted RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 A0A0A6YYK5 440 aaPredicted RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 SMIM35A0A1B0GVV1 85 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 GRID2IPA4D2P6 1211 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 ANKRD62A6NC57 917 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 BTNL10A8MVZ5 291 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 LACTBL1A8MY62 500 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 GPR25O00155 361 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 ZNF185O15231 689 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 THAP12O43422 761 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 TSPAN1O60635 241 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 KPNA6O60684 536 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 F2P00734 622 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 CALCAP01258 141 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 TFRCP02786 760 aaKnown RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 FTLP02792 175 aaPredicted RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 RHOXF2BP0C7M4 288 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 RARBP10826 455 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 HOXD8P13378 290 aaPredicted RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 CYP11B1P15538 503 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 ARF4P18085 180 aaPredicted RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 PROZP22891 400 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 GNA15P30679 374 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 CXCR5P32302 372 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 FLT3LGP49771 235 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 MYL6P60660 151 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms