RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 VAMP7P51809 220 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 AP3M2P53677 418 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 KCNJ12Q14500 433 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 CLLU1OSQ5K130 101 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 LUZP1Q86V48 1076 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 IRF2BP1Q8IU81 584 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 TRIM59Q8IWR1 403 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 RNF169Q8NCN4 708 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 ANKRD20A12PQ8NF67 263 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 PARD3BQ8TEW8 1205 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 LPPQ93052 612 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 EEF2KMTQ96G04 330 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 FNBP1Q96RU3 617 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 TMEM117Q9H0C3 514 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 HSD3B7Q9H2F3 369 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 RC3H2Q9HBD1 1191 aaKnown RBP15.6■□□□□ 0.09
COL5A3-202ENST00000461214 RNF19AQ9NV58 838 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 SLC38A7Q9NVC3 462 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 FANCLQ9NW38 375 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 KANSL3Q9P2N6 904 aa15.6■□□□□ 0.09
COL5A3-202ENST00000461214 ARL5CA6NH57 179 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 MEIS3P2A8K0S8 358 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 MEFVO15553 781 aaPredicted RBP15.59■□□□□ 0.09
COL5A3-202ENST00000461214 DGKIO75912 1065 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 TMEM132DQ14C87 1099 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 TCP11X2Q5H9J9 407 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 LRRC43Q8N309 656 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 RDH13Q8NBN7 331 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 GDPD5Q8WTR4 605 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 SLC35C1Q96A29 364 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 ZFP42Q96MM3 310 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 GAD1Q99259 594 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 PHOX2BQ99453 314 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 PDE11AQ9HCR9 933 aa15.59■□□□□ 0.09
COL5A3-202ENST00000461214 SAMSN1Q9NSI8 373 aaKnown RBP15.59■□□□□ 0.09
COL5A3-202ENST00000461214 CARNS1A5YM72 827 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 LACTBL1A8MY62 500 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 PTGESO14684 152 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 N4BP1O75113 896 aaKnown RBP15.58■□□□□ 0.08
COL5A3-202ENST00000461214 OFD1O75665 1012 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 GJB5O95377 273 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 TPM2P07951 284 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 FGFR1P11362 822 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 KCNA5P22460 613 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 GTF2H1P32780 548 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 MAN2A1Q16706 1144 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 DCAF17Q5H9S7 520 aaPredicted RBP15.58■□□□□ 0.08
COL5A3-202ENST00000461214 NOMO2Q5JPE7 1267 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 EFCAB13Q8IY85 973 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 CMTR2Q8IYT2 770 aaKnown RBP15.58■□□□□ 0.08
COL5A3-202ENST00000461214 GSTCDQ8NEC7 633 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 HELQQ8TDG4 1101 aa15.58■□□□□ 0.08
COL5A3-202ENST00000461214 ZNF689Q96CS4 500 aaPredicted RBP15.58■□□□□ 0.08
COL5A3-202ENST00000461214 PPP1R10Q96QC0 940 aaKnown RBP15.58■□□□□ 0.08
COL5A3-202ENST00000461214 UBQLN1Q9UMX0 589 aaKnown RBP15.58■□□□□ 0.08
COL5A3-202ENST00000461214 SMIM28A0A1B0GU29 152 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 LRRIQ3A6PVS8 624 aaPredicted RBP15.57■□□□□ 0.08
COL5A3-202ENST00000461214 LPXNO60711 386 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 THP07101 528 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 NFICP08651 508 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 TMEM191BP0C7N4 346 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 DLATP10515 647 aaKnown RBP15.57■□□□□ 0.08
COL5A3-202ENST00000461214 IL9P15248 144 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 CYP3A5P20815 502 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 MTIF2P46199 727 aaKnown RBP15.57■□□□□ 0.08
COL5A3-202ENST00000461214 SCNN1GP51170 649 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 HTRA4P83105 476 aaPredicted RBP15.57■□□□□ 0.08
COL5A3-202ENST00000461214 TCERG1LQ5VWI1 586 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 JADE1Q6IE81 842 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 HERC6Q8IVU3 1022 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 PLEKHO2Q8TD55 490 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 CACTINQ8WUQ7 758 aaKnown RBP15.57■□□□□ 0.08
COL5A3-202ENST00000461214 CCDC127Q96BQ5 260 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 KIF12Q96FN5 646 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 ANKRD36BP1Q96IX9 119 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 CASD1Q96PB1 797 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 UBE2ZQ9H832 354 aaPredicted RBP15.57■□□□□ 0.08
COL5A3-202ENST00000461214 INTS13Q9NVM9 706 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 KLK14Q9P0G3 267 aa15.57■□□□□ 0.08
COL5A3-202ENST00000461214 LIMA1Q9UHB6 759 aaKnown RBP15.57■□□□□ 0.08
COL5A3-202ENST00000461214 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.57■□□□□ 0.08
COL5A3-202ENST00000461214 RBAK-RBAKDNI3L0D1 243 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 PMM2O15305 246 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 UPP2O95045 317 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 TNNC2P02585 160 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 TNNI1P19237 187 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 IBSPP21815 317 aaPredicted RBP15.56■□□□□ 0.08
COL5A3-202ENST00000461214 WNT7BP56706 349 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 DSC1Q08554 894 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 TUSC3Q13454 348 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 KRT31Q15323 416 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 NAB2Q15742 525 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 ZBTB6Q15916 424 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 GAS2L3Q86XJ1 694 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 RNF214Q8ND24 703 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 BEST2Q8NFU1 509 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 UROC1Q96N76 676 aa15.56■□□□□ 0.08
COL5A3-202ENST00000461214 ZMAT2Q96NC0 199 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms