RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 TMEM132DQ14C87 1099 aa13.16□□□□□ -0.3
ERGIC3-211ENST00000461043 SNRNP35Q16560 246 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-211ENST00000461043 TCEAL5Q5H9L2 206 aa13.16□□□□□ -0.3
ERGIC3-211ENST00000461043 FUT10Q6P4F1 479 aa13.16□□□□□ -0.3
ERGIC3-211ENST00000461043 ADGRD2Q7Z7M1 963 aa13.16□□□□□ -0.3
ERGIC3-211ENST00000461043 NT5DC4Q86YG4 428 aa13.16□□□□□ -0.3
ERGIC3-211ENST00000461043 ADSSL1Q8N142 457 aa13.16□□□□□ -0.3
ERGIC3-211ENST00000461043 MRPL43Q8N983 215 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-211ENST00000461043 KIAA1468Q9P260 1216 aa13.16□□□□□ -0.3
ERGIC3-211ENST00000461043 MAPK8IP1Q9UQF2 711 aa13.16□□□□□ -0.3
ERGIC3-211ENST00000461043 SF3B1O75533 1304 aaKnown RBP eCLIP13.15□□□□□ -0.31e-6■■■■■ 50.3
ERGIC3-211ENST00000461043 ANO9A1A5B4 782 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 C2orf71A6NGG8 1288 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 ZNF233A6NK53 670 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 TADA2AO75478 443 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 B3GAT3O94766 335 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 NR3C1P04150 777 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 AARSP49588 968 aaKnown RBP eCLIP13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 CYP2J2P51589 502 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 GUCY2FP51841 1108 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 CYP24A1Q07973 514 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 HYAL1Q12794 435 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 SMC1AQ14683 1233 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 PTPN14Q15678 1187 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 CAMK4Q16566 473 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 CTC1Q2NKJ3 1217 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 KIAA0319Q5VV43 1072 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 PLPP4Q5VZY2 271 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 CENPPQ6IPU0 288 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 TMC7Q7Z402 723 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 ZC3H3Q8IXZ2 948 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 GPR65Q8IYL9 337 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 CXorf38Q8TB03 319 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 MFSD14AQ96MC6 490 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 PDE11AQ9HCR9 933 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 ENTPD7Q9NQZ7 604 aa13.15□□□□□ -0.3
ERGIC3-211ENST00000461043 PTPRJQ12913 1337 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 PIRO00625 290 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 XPOTO43592 962 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 CALUO43852 315 aaPredicted RBP13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 CSPG5O95196 566 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 MCCD1P59942 119 aaPredicted RBP13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 DSG1Q02413 1049 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 KCNC3Q14003 757 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 PSMD6Q15008 389 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 CCDC85BQ15834 202 aaPredicted RBP13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 EDRF1Q3B7T1 1238 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 MICALL1Q8N3F8 863 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 BEST2Q8NFU1 509 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 HASPINQ8TF76 798 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 AUTS2Q8WXX7 1259 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 RXFP1Q9HBX9 757 aa13.14□□□□□ -0.31
ERGIC3-211ENST00000461043 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 PPEF2O14830 753 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 MAPK13O15264 365 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 EXOC3O60645 756 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 CXCL14O95715 111 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 FGFR3P22607 806 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 GTF2F1P35269 517 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 GLUD2P49448 558 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 CASP4P49662 377 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 CLDN10P78369 228 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 ELAVL2Q12926 359 aaKnown RBP13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 SURF1Q15526 300 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 DUSP6Q16828 381 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 USP41Q3LFD5 358 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 RTP2Q5QGT7 225 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 C9orf57Q5W0N0 161 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 FOXR2Q6PJQ5 311 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 C1orf127Q8N9H9 656 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 TRIML1Q8N9V2 468 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 PLEKHO2Q8TD55 490 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 FAM84AQ96KN4 292 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 B3GALT6Q96L58 329 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 INTS13Q9NVM9 706 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 DPP3Q9NY33 737 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 BRWD1Q9NSI6 2320 aa13.13□□□□□ -0.31
ERGIC3-211ENST00000461043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 M0QZQ0 153 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 BIN1O00499 593 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 NCK2O43639 380 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 AKAP3O75969 853 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 URODP06132 367 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 NR2F2P24468 414 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 PPP1R2P41236 205 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 BRCC3P46736 316 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 NRIP1P48552 1158 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 PMS1P54277 932 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 FAM171A1Q5VUB5 890 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 ISM2Q6H9L7 571 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 RBM43Q6ZSC3 357 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 WDR49Q8IV35 697 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 EFHBQ8N7U6 833 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms