RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 EPHA5P54756 1037 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 JAG1P78504 1218 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 MVKQ03426 396 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 PPARAQ07869 468 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 LRRC32Q14392 662 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 HLTFQ14527 1009 aaKnown RBP eCLIP5.69□□□□□ -1.53e-6■■■□□ 19.2
SF3A3-202ENST00000460925 RRP1BQ14684 758 aaKnown RBP5.69□□□□□ -1.5
SF3A3-202ENST00000460925 NECTIN1Q15223 517 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 NR0B2Q15466 257 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 FAM47AQ5JRC9 791 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 RRP12Q5JTH9 1297 aaKnown RBP5.69□□□□□ -1.5
SF3A3-202ENST00000460925 CCSAPQ6IQ19 270 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-202ENST00000460925 CC2D1AQ6P1N0 951 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-202ENST00000460925 USP50Q70EL3 339 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-202ENST00000460925 MIGA2Q7L4E1 593 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 RASGRP2Q7LDG7 609 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 CHST3Q7LGC8 479 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 PTRH1Q86Y79 214 aaKnown RBP5.69□□□□□ -1.5
SF3A3-202ENST00000460925 CREBRFQ8IUR6 639 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 TMEM151AQ8N4L1 468 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 KIAA1958Q8N8K9 716 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 PIP4K2CQ8TBX8 421 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 CCDC120Q96HB5 630 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 FUBP3Q96I24 572 aaKnown RBP eCLIP5.69□□□□□ -1.5
SF3A3-202ENST00000460925 TEPSINQ96N21 525 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 ELF4Q99607 663 aaPredicted RBP5.69□□□□□ -1.5
SF3A3-202ENST00000460925 MRIQ9BWK5 157 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 IDI2Q9BXS1 227 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 UPF3BQ9BZI7 483 aaKnown RBP5.69□□□□□ -1.5
SF3A3-202ENST00000460925 PDLIM7Q9NR12 457 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 ACSS2Q9NR19 701 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 TOMM22Q9NS69 142 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 FBLN5Q9UBX5 448 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 PGAP2Q9UHJ9 254 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 TMEM59LQ9UK28 342 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 DSEQ9UL01 958 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 RWDD3Q9Y3V2 267 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 SNX14Q9Y5W7 946 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 ROBO3Q96MS0 1386 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 CFAP69A5D8W1 941 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 E7EWF7 191 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 KRIT1O00522 736 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 NMT2O60551 498 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 MAFKO60675 156 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 HIP1RO75146 1068 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 TADA3O75528 432 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 USP2O75604 605 aaPredicted RBP5.68□□□□□ -1.5
SF3A3-202ENST00000460925 ZRANB2O95218 330 aaKnown RBP eCLIP5.68□□□□□ -1.5
SF3A3-202ENST00000460925 CYP17A1P05093 508 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 RBP3P10745 1247 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 COL6A2P12110 1019 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 VEGFAP15692 232 aaPredicted RBP5.68□□□□□ -1.5
SF3A3-202ENST00000460925 KRT15P19012 456 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 SHMT1P34896 483 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 HSPA4P34932 840 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 GJA4P35212 333 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 ZP2Q05996 745 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 BNIP3Q12983 259 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 ALX1Q15699 326 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 RALGPS1Q5JS13 557 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 TMEM240Q5SV17 173 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 FAM102BQ5T8I3 360 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 C12orf60Q5U649 245 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 TAF3Q5VWG9 929 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 CEP128Q6ZU80 1094 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 CYB5R4Q7L1T6 521 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 RAB11FIP4Q86YS3 637 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 SPPL2CQ8IUH8 684 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 APOBEC3FQ8IUX4 373 aaKnown RBP5.68□□□□□ -1.5
SF3A3-202ENST00000460925 ZZZ3Q8IYH5 903 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 MYO1HQ8N1T3 1032 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 PDZD8Q8NEN9 1154 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 PHOSPHO1Q8TCT1 267 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 FAM151AQ8WW52 585 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 DCPSQ96C86 337 aaKnown RBP5.68□□□□□ -1.5
SF3A3-202ENST00000460925 CDCA5Q96FF9 252 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 JAKMIP1Q96N16 626 aaKnown RBP5.68□□□□□ -1.5
SF3A3-202ENST00000460925 SPOCK3Q9BQ16 436 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 RHOBTB2Q9BYZ6 727 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 C22orf23Q9BZE7 217 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 DEFB129Q9H1M3 183 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 ATP8A2Q9NTI2 1148 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 ARPP21Q9UBL0 812 aaPredicted RBP5.68□□□□□ -1.5
SF3A3-202ENST00000460925 SLC5A6Q9Y289 635 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 COL2A1P02458 1487 aaPredicted RBP5.68□□□□□ -1.5
SF3A3-202ENST00000460925 ZMYM6O95789 1325 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 MYH6P13533 1939 aa5.68□□□□□ -1.5
SF3A3-202ENST00000460925 BAZ2BQ9UIF8 2168 aaKnown RBP5.67□□□□□ -1.5
SF3A3-202ENST00000460925 ZNF213O14771 459 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 SH3BP5O60239 455 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 ENTPD3O75355 529 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 CFBP00751 764 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 HLA-DOAP06340 250 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 FAM200BP0CF97 657 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 CD8BP10966 210 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 AKR1B1P15121 316 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 SLC9A1P19634 815 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 CASTP20810 708 aaKnown RBP5.67□□□□□ -1.5
SF3A3-202ENST00000460925 SDHAP31040 664 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 KIF11P52732 1056 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms