RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 LRRC47Q8N1G4 583 aaKnown RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CPA6Q8N4T0 437 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLC20A1Q8WUM9 679 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 EPSTI1Q96J88 318 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 APBA2Q99767 749 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FAM167BQ9BTA0 163 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CNPPD1Q9BV87 410 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 VTA1Q9NP79 307 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DNAJC17Q9NVM6 304 aaKnown RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SBF2Q86WG5 1849 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 N4BP2Q86UW6 1770 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GPR75-ASB3A0A0A6YYF3 556 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GMNCA6NCL1 334 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ADH1AP07327 375 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ERVK-10P10266 1014 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CKBP12277 381 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GARTP22102 1010 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GRK4P32298 578 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PLTPP55058 493 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DAB2P98082 770 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PRKAA1Q13131 559 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ARHGAP44Q17R89 818 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 BEND6Q5SZJ8 279 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SCYL2Q6P3W7 929 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 APOA5Q6Q788 366 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TRIM42Q8IWZ5 723 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 OR6B3Q8NGW1 331 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 AP1M1Q9BXS5 423 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NFKBIZQ9BYH8 718 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 USP18Q9UMW8 372 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 UBE2Q2LH0YL09 131 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 I3L4J1 428 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MEFVO15553 781 aaPredicted RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ESRRBO95718 433 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CASP1P29466 404 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RFX5P48382 616 aaPredicted RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MTMR1Q13613 665 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PABPC1LQ4VXU2 614 aaKnown RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SNX30Q5VWJ9 437 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ATG9AQ7Z3C6 839 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 BLIDQ8IZY5 108 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KCNV2Q8TDN2 545 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ATP6V1E2Q96A05 226 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 E2F7Q96AV8 911 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CCDC127Q96BQ5 260 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SEPT3Q9UH03 358 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SCOCQ9UIL1 159 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GGT7Q9UJ14 662 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PTPN22Q9Y2R2 807 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SPEF2Q9C093 1822 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 LAMB2P55268 1798 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ARHGAP42A6NI28 874 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ADCY6O43306 1168 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PQBP1O60828 265 aaKnown RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MMP1P03956 469 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 OCM2P0CE71 109 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 OCMP0CE72 109 aaPredicted RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CYP2C9P11712 490 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GPC3P51654 580 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF280AP59817 542 aaPredicted RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZBED6P86452 979 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SGCGQ13326 291 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PKN1Q16512 942 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FAM47AQ5JRC9 791 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FAM47EQ6ZV65 393 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NLRP4Q96MN2 994 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MSTO1Q9BUK6 570 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PUS3Q9BZE2 481 aaKnown RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DNAJC11Q9NVH1 559 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MYO1FO00160 1098 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CASQ2O14958 399 aaPredicted RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GH2P01242 217 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ADCY8P40145 1251 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ANXA11P50995 505 aaKnown RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 IZUMO3Q5VZ72 239 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 EFCAB3Q8N7B9 438 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ARL10Q8N8L6 244 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CFAP61Q8NHU2 1237 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SEPT1Q8WYJ6 367 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RILPQ96NA2 401 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NEUROG2Q9H2A3 272 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 L2HGDHQ9H9P8 463 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TRPM5Q9NZQ8 1165 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RNF14Q9UBS8 474 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PIN4Q9Y237 131 aaKnown RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 IRS2Q9Y4H2 1338 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 COL2A1P02458 1487 aaPredicted RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 H3BM21 787 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KRT20P35900 424 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 LONP1P36776 959 aaKnown RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 THPOP40225 353 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 VPS41P49754 854 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 HMGCS2P54868 508 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CDK17Q00537 523 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ITPRIPL1Q6GPH6 555 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CASC4Q6P4E1 433 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NOTUMQ6P988 496 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KLHL35Q6PF15 583 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CAPN12Q6ZSI9 719 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms