RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 CFAP61Q8NHU2 1237 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 B4GALNT2Q8NHY0 566 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 BTBD6Q96KE9 485 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 FAM210AQ96ND0 272 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 TRAIPQ9BWF2 469 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 VPS33BQ9H267 617 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 PCMTD2Q9NV79 361 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 ZFP69BQ9UJL9 534 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 ZNF541Q9H0D2 1346 aa16.47■□□□□ 0.23
SSR4-206ENST00000460616 SPATA31C1P0DKV0 1188 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 BCRP11274 1271 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 RPA1P27694 616 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 CDR2Q01850 454 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 OCRLQ01968 901 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 DYNC1I2Q13409 638 aaKnown RBP16.46■□□□□ 0.23
SSR4-206ENST00000460616 SPDYAQ5MJ70 313 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 RFWD3Q6PCD5 774 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 MAML1Q92585 1016 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 LNPEPQ9UIQ6 1025 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 FSCN2O14926 492 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 ATMINO43313 823 aaPredicted RBP16.46■□□□□ 0.23
SSR4-206ENST00000460616 ATF2P15336 505 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 MYL7Q01449 175 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 RCN1Q15293 331 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 ZRSR2Q15696 482 aaKnown RBP16.46■□□□□ 0.23
SSR4-206ENST00000460616 RGS9BPQ6ZS82 235 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 ZC3H18Q86VM9 953 aaKnown RBP16.46■□□□□ 0.23
SSR4-206ENST00000460616 DENND1AQ8TEH3 1009 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 C10orf82Q8WW14 230 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 NRG4Q8WWG1 115 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 BHMT2Q9H2M3 363 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 UBE2TQ9NPD8 197 aaPredicted RBP16.46■□□□□ 0.23
SSR4-206ENST00000460616 FRMD4BQ9Y2L6 1034 aa16.46■□□□□ 0.23
SSR4-206ENST00000460616 MAGEA13PA6NCF6 341 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 USP17L15C9J2P7 530 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 USP17L13C9JLJ4 530 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 USP17L11C9JVI0 530 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 USP17L18D6R9N7 530 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 USP17L22D6RA61 530 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 USP17L17D6RBQ6 530 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 USP17L19D6RCP7 530 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 USP17L20D6RJB6 530 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 MTA2O94776 668 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 LDHCP07864 332 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 USP17L24Q0WX57 530 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 PTK6Q13882 451 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 SLC45A4Q5BKX6 768 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 USP17L6PQ6QN14 398 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 SYDE1Q6ZW31 735 aaPredicted RBP16.45■□□□□ 0.22
SSR4-206ENST00000460616 PRUNE1Q86TP1 453 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 C9orf72Q96LT7 481 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 MKNK1Q9BUB5 465 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 PLVAPQ9BX97 442 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 SAR1AQ9NR31 198 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 CHST7Q9NS84 486 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 HNRNPCL1O60812 293 aaKnown RBP16.45■□□□□ 0.22
SSR4-206ENST00000460616 GAS8O95995 478 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 EIF6P56537 245 aaKnown RBP16.45■□□□□ 0.22
SSR4-206ENST00000460616 SPIRE1Q08AE8 756 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 COG2Q14746 738 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 PDK4Q16654 411 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 ZC2HC1CQ53FD0 456 aaPredicted RBP16.45■□□□□ 0.22
SSR4-206ENST00000460616 DSTYKQ6XUX3 929 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 MTDHQ86UE4 582 aaKnown RBP16.45■□□□□ 0.22
SSR4-206ENST00000460616 RBM41Q96IZ5 413 aaKnown RBP16.45■□□□□ 0.22
SSR4-206ENST00000460616 MIPEPQ99797 713 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 MTMR4Q9NYA4 1195 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 EURLQ9NYK6 297 aa16.45■□□□□ 0.22
SSR4-206ENST00000460616 GSTTP1A0A1W2PQM5 241 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 FAM196BA6NMK8 535 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 VIL1P09327 827 aaKnown RBP16.44■□□□□ 0.22
SSR4-206ENST00000460616 NMT1P30419 496 aaKnown RBP16.44■□□□□ 0.22
SSR4-206ENST00000460616 VPS41P49754 854 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 CYP2J2P51589 502 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 SLC34A1Q06495 639 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 NR1H3Q13133 447 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 RSBN1LQ6PCB5 846 aaPredicted RBP16.44■□□□□ 0.22
SSR4-206ENST00000460616 ZNF564Q8TBZ8 553 aaPredicted RBP16.44■□□□□ 0.22
SSR4-206ENST00000460616 ATG4AQ8WYN0 398 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 NUP85Q9BW27 656 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 CADM1Q9BY67 442 aaKnown RBP16.44■□□□□ 0.22
SSR4-206ENST00000460616 UBN1Q9NPG3 1134 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 OLFML3Q9NRN5 406 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 CYP3A7-CYP3A51PA0A087WV96 503 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 CAPN9O14815 690 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 TJP3O95049 919 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 SNHG28P0DPA3 235 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 MUTP22033 750 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 CYP3A7P24462 503 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 ARMC3Q5W041 872 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 TTBK2Q6IQ55 1244 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 LRRC74BQ6ZQY2 392 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 NLRP9Q7RTR0 991 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 TRABD2AQ86V40 505 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 RIBC1Q8N443 379 aaPredicted RBP16.44■□□□□ 0.22
SSR4-206ENST00000460616 MYCT1Q8N699 235 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 GRK7Q8WTQ7 553 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 GATA6Q92908 595 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 GBP5Q96PP8 586 aa16.44■□□□□ 0.22
SSR4-206ENST00000460616 PCDHB18PQ96TA0 734 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms